Salmo salar (Atlantic salmon): 106579020
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Entry
106579020 CDS
T04363
Symbol
sox8
Name
(RefSeq) SRY-box 8
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106579020 (sox8)
Transcription factors [BR:
sasa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
106579020 (sox8)
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
106579020
NCBI-ProteinID:
XP_014013894
UniProt:
A0A1S3NEM9
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Position
ssa19:48957125..48960308
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AA seq
478 aa
AA seq
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MTEENVKSFNNHPCSPTGTASSMSQDDSDSDVPSSPTGSDGQAPRHSPGDGITPKLDTGE
EDNRFPACIRDAVTQVLNGYDWSLVPMPTRGDRALKNKPHVKRPMNAFMVWAQAARRKLA
DQYPHLHNAELSKTLGKLWRLLSESEKRPFVEEAERLRVQHKKDYPDYKYQPRRRKSTKP
GQSDSDSGAELAHLHPGQMYKAEPGLARPTSMGDGQHHLDRTSICCVFSKGQPHGPPTPP
TTPKTELHLGVKHEGRQNIDFSNVDISELSTDVISNMEAFDVHEFDQYLPLNGHGSADAP
PNHGQGGQGPNPPSGSLSSSYSHSHSNASPWGPKGPGAGAAPPSSSSSSSNSDGIHHRTQ
IKTEQLSPRHYSSQHSHSSPPPHPDYTPLNSGSCPSSAASSSSSSLPSPQCDYADLQSPG
YYSAYTSYPAGLYQYPYFHSSRHPYGSPLINSLAIPPPHSHSPTTNWEQTVYSTLTRP
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggaaaatgttaagtcgttcaacaaccatccatgcagtccaacgggaactgcc
agctcgatgtcgcaggacgactcggattcggacgtcccgtcctctccaaccggctccgat
ggacaggcgcccaggcactcacccggcgacgggattaccccaaaactggacaccggcgag
gaggataaccggtttcccgcgtgcatccgagacgcggtgactcaggtgctgaacggatac
gactggtcgctcgtaccgatgcctacacgaggagaccgagctctgaaaaacaaaccccat
gtgaagcggccaatgaacgcgttcatggtgtgggcgcaggcggcgcgcaggaaactagcg
gaccagtacccgcatctccacaacgccgaactcagcaagaccttggggaagctatggcgc
ctgctctctgaaagcgagaagaggccatttgtggaggaggcagagagactgagggtccaa
cacaagaaagactaccctgactacaagtaccaaccacggagaaggaagagcaccaagcca
ggtcagagtgactcggactccggggctgagctggcccacctccacccgggccagatgtac
aaggctgaacctggtctggccagaccgacctccatgggggatgggcaacatcatctagat
cggacaagcatctgttgtgtcttttctaaaggccaaccacatggaccccccacacccccc
accaccccaaagacagagctgcacctgggggtgaaacacgagggtcggcagaacatcgac
ttcagcaacgtggatatctcagagctgagcactgacgtcatcagcaacatggaggccttc
gacgtccacgagtttgatcagtacctgccactcaacgggcatggctctgccgatgcacct
cccaaccatgggcagggggggcaaggacccaaccccccctctgggtccctaagctcctcc
tacagccactcccacagcaatgcctcgccttggggtcccaaagggccgggagcgggggcg
gcacccccttcttcctcctcgtcctcaagtaacagcgatggcattcaccacagaacgcag
atcaaaacggagcagctgagtcccaggcactacagcagccagcactcccacagctcccca
ccaccccaccccgactacacccccctcaactccgggagctgtccctcctctgcagcctcc
tcttcctcctcctccttgcccagcccccagtgtgactatgcagacctccagagccctgga
tactacagtgcctacaccagctaccccgcaggtctctatcagtacccctacttccactcg
tctcgccacccctacggcagcccgctcatcaacagcctagcaatccctccaccacacagc
cacagccccaccacaaactgggagcagactgtctattccacactcaccaggccttag
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