KEGG   Salmo salar (Atlantic salmon): 106586740
Entry
106586740         CDS       T04363                                 
Name
(RefSeq) DNA repair protein REV1-like
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
sasa  Salmo salar (Atlantic salmon)
Pathway
sasa03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:sasa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    106586740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sasa03400]
    106586740
DNA repair and recombination proteins [BR:sasa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    106586740
SSDB
Motif
Pfam: IMS REV1_C IMS_C BRCT_2 UBM BRCT POLH-Rev1_HhH LIG3_BRCT IMS_HHH Cdd1 HHH_5 PTCB-BRCT HHH DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 106586740
NCBI-ProteinID: XP_014029790
UniProt: A0A1S3PQ16
LinkDB
Position
ssa25:38656378..38707406
AA seq 1684 aa
MAAKVSKLDEQLKLDAPREKLKDGPCSIIFTGVAIYVNGYTLCVCVCVCVRVRARAQGGY
MAAKVSKLDEQLKLDAPREKLKDGACSIIFTGVAIYVNGYTEPSVNELRRLMNLHGGQFH
MYYSHSNTTHIIATNLPNSKIQELRDQKVVRPEWITDSIKAGHLLSYLQYQLYAKQKGLS
FPSVSVHQGQEPAGPHHGHLLPSHSLPLPSLNNHNPAPSLGQPLSRHHTPTSSHSHLHTD
NLHPQPNHYNPLASHCSPQPSHSLPSHLGSQPSHSLPSHLGPQPSHSLPSHLGPRPSHSL
PSHLGPRSSHSLPSHLGPRPSHSLPSLLGPRPSHLGPRPSHLGPRPSHLGPRPSHLGPRP
SHLGPQPSHLGPQPSHLGPQPSQLSSQSRHLTLGPSLLGPFSSNHLYSDPGHITHHPPRH
GKPKLGCIQPPPSAYTHPQTPGPVPANPSHKRSKPGQAQPPSILCISSHLQHSYRELDFR
LNGSLLTSYEKTGSVKMNGVQELGGEDPCPVKTPRGVKDPTLTNSHAHPVNGAIKPLDLS
PHPTRPTPTTDRGLPHTLQSIPPQPDSPLSKPPIQHDTLRPPPVSHHRHHAQPANEQRPK
PPPPTYQEAMAASTSCPLDLPPQSDFPPEKPLPPANPNPSPSPVCLNGSHHNVFPSNPTP
LETNNLSANTFPSNPTPLETNNLSANAFPLNPAPLETNNLSANTFPSNPTPLETNNLSAN
TFPSNPTPLETNNLSANTFPSNPTPLETNNLSANAFPSNPAPLEINNLSANPFPSNYAPL
HHDQQSAKVKTGGIISEFYSHSRLHHISTWRSEFSEYVNMLQSRRRATEGTTFPGRDRLR
RQRREGLSAAPGPQSCILHVDMDCFFVSVGIRHRPDLKGKSVAVTSNRGSGRVAQRPGVD
RQLELQYYQKTYCYPAVSERKDGDLEEMTSSETESHISHGNSVDQGTAALSMAEIASCSY
EARQAGVRNGMIFGQAKQLCPSLQSVPYDFQAYKKVALAMYETLASYSHDIEALSCDEAL
VDSSALLAELSVTPDELASAIRADVRERTGCSASVGMGSNILLARMATRKAKPNGQYFLR
SEEVDDFIRDQTVTSLPGVGRSMAGKLASLGVRSCGDLQQVSLQRLQKEFGPRTGQTLFR
FCRGLDDRPVRSEKERKSVSAEMNYNIRFTQVDEAESFLTNLSIEVQKRLQGAGLRGRRL
TLKVMVCKAGAPVEPSKYSGHGTCDNLARSVTLAQLTDCGHLIASEVIKLFHTMRLKVQD
MRGVGLQVQLLEGAHSVPKDPSCPKTCSIRDKILAQRPPAQHNHTDSLPNTAITCTNQEK
SSSARVLPPFSTPRPTSPAEPIPGTSKGEPPPSTRTPNHVGTHLNLSIEVSPPSQVDRSV
LEALPAELREQVEHSWTHRHTERTHNGSHQHPLHPYPSSPGPSSPLSSCSSSPLPSPVGG
LVIQIPNQPGQTGSTGIILELPDFSQVDPEVFAALPRELQEELRSAYGRRENAQAQGIMD
QRNPLLHLKHVGVGRMKRCYKNANNSPAKKGPSPLKRPRPPGNSPAKDLPHVLRSRDLPN
GLKLETGPSTSSLQQDDPETLSKFTPRPEPTLAGACDFMDIRTLLREWVTTISDPMEEDI
LQVVKYCTDLINDKNLEKLALIIKYMKRLMQQSVESVWSMAFDFILDNVQVVVQQTYGST
LKIT
NT seq 5055 nt   +upstreamnt  +downstreamnt
atggctgccaaggtgtccaagctggatgagcagttaaagctggacgccccgagagagaag
ctgaaagatggcccctgctccattatcttcactggggtggccatctatgtcaacgggtac
actctgtgtgtgtgtgtgtgtgtgtgtgtgcgtgtgcgcgcgcgcgcgcagggtgggtac
atggctgccaaggtgtccaagctggatgagcagttaaagctggacgccccgagagagaag
ctgaaagatggcgcctgctccattatcttcactggggtggccatctatgtcaacgggtac
acagagcccagtgtgaacgagctgcgcaggctgatgaatctgcatgggggtcagttccac
atgtactactcccactctaacaccacccacatcatcgctaccaacctgcccaacagtaag
atacaggagctgagggaccagaaggtggtccggccagagtggatcactgacagtatcaag
gctggccatctcctgtcctacttgcagtaccagctctatgccaagcagaaaggcctgagc
ttccccagtgtgtctgttcaccagggccaagagcctgcaggaccccaccatgggcacctc
ctacccagccacagcctccctttacccagcctcaataaccacaacccagcccctagcctt
gggcagcccctatccaggcaccacactcctacatccagccacagtcatctacacacagac
aatctacacccccaacccaaccactataaccccctagctagccactgcagcccccagccc
agccactctctccccagccacctcggctcccagcccagccactctctccccagccacctc
ggcccccagcccagccactctctccccagccacctcggcccccggcccagccactctctc
cccagccacctcggcccccggtccagccactctctccccagccacctcggcccccggccc
agccactctctccccagcctcctcggcccccggcccagccacctcggcccccggccaagc
cacctcggcccccggccaagccacctcggcccccggccaagccacctcggcccccggcca
agccacctcggcccccagccaagccacctcggcccccagcccagccacctcggcccccag
cccagtcaactcagctctcagtccaggcacctcactctaggacccagcctcctcggcccc
ttttcctccaaccacctttactctgacccagggcacatcacccaccacccacccaggcac
gggaaacccaagttaggctgcatccagcctcctccttcagcctatacccacccacagacc
cctggtcccgtccctgcaaaccccagccacaagcgctctaaacctggacaggcacaacct
ccttccatcctctgcatctccagtcacctccagcacagctaccgggagctggacttcaga
ctgaatggatcattactgacctcttatgaaaagactggtagcgtcaaaatgaacggggtc
caagagttgggtggtgaggacccctgtcctgtcaaaactcccagaggggtgaaggacccc
actctgaccaacagtcacgcccatcctgtgaatggtgccataaagcctctggacctctcc
ccacaccccacacgacccacacccactacagacagggggttaccccatactctccaatcc
atacccccacagcctgacagccccttatccaaaccccctatccaacatgacaccctcaga
cctccccctgtctctcaccacagacaccacgcacaaccggccaatgaacagagacccaag
ccccctccgcccacctatcaggaggccatggctgcctcgacatcctgccccctagatctc
ccgcctcaatcagatttccctcctgagaaaccactcccccctgctaacccaaacccctcc
ccttcccctgtctgtctgaatggcagccaccacaatgtttttccttctaaccccaccccc
ctggaaaccaacaacctatcagccaacacctttccttctaaccccacccccctggaaacc
aacaacctatcagccaacgcctttcccttgaaccctgcccctctggaaaccaacaaccta
tcagccaacacctttccttctaaccccacccccctggaaaccaacaacctatcagccaac
acctttccttctaaccccacccccctggaaaccaacaacctatcagccaacacctttcct
tctaaccccacccccctggaaaccaacaacctatcagccaatgcctttccctcgaaccct
gcccccctggaaatcaacaacttatcagccaacccctttccctcaaactacgctcctctg
caccacgaccaacaatcagcaaaggtaaagaccggggggatcatctcagagttttactcc
cactctcgtctacaccacatctccacgtggaggagtgagttctctgagtatgtcaacatg
ttgcagagcaggaggagggccacagagggtaccaccttccccgggagagacaggctcaga
cgccagaggagagagggtttgtcagctgctcctggccctcagtcctgtatcctgcatgtg
gacatggactgtttctttgtctccgtggggatcagacaccgaccagacctcaaagggaag
tctgtagcggtgaccagtaaccgtggttcaggcagagtggcccagagacctggtgttgac
cgccagctggagctgcagtactaccagaaaacatattgctatccagctgtgtcagagagg
aaggatggggacctggaggaaatgacatcatcagagacggagagtcacatctcccatggc
aacagtgttgaccagggtactgctgccctctctatggctgagatcgcctcctgtagctat
gaggccaggcaggcgggggtgaggaacgggatgatttttggccaggccaaacagctgtgt
ccctccctgcagtctgtcccttatgacttccaggcctacaagaaggtggccctggccatg
tacgagaccctcgccagttattctcacgacatcgaggccctgagttgtgacgaggcgttg
gtggatagctccgccctgctggccgagttgagtgttacaccagatgaacttgccagtgcc
atccgggcagacgtcagggagaggactgggtgctctgcctcagtgggcatggggtccaac
atcctgttggcgagaatggctacccggaaggctaagccgaacggacagtacttcctgagg
tcagaggaagtggacgacttcatcagggaccagacggtgaccagcctaccaggtgtgggc
cgttctatggctggtaaactggcatctctgggtgtgaggtcatgtggggacctgcagcag
gtgtctctgcagcggctgcagaaggagtttggccctcgcaccggtcagaccctcttcagg
ttctgccgaggtctggacgaccggcccgtccgtagcgagaaggagaggaagtctgtctcg
gctgagatgaactacaacatccgcttcacacaggtggacgaggcggagtcgttcctgacc
aacctgtccattgaggtgcagaagcgactgcagggggcggggcttaggggtcgcaggctg
accctaaaggtcatggtctgtaaggcaggggccccggtggagccatccaagtacagtggt
catggcacctgtgacaatttggctaggtcagtgaccctggcccagcttacagactgtggt
catctgatagccagtgaggtcatcaagctgttccacacaatgaggctgaaggtgcaggac
atgaggggggtgggcctccaggtgcagctcctcgagggggcccactccgtccccaaggac
ccctcgtgccctaaaacatgctccatcagagacaagatactggcccagcgcccccctgcc
caacataaccacacagattcgctacctaataccgccattacatgcaccaatcaggagaag
agttcctctgccagagtcctgccccccttctccactccccgccctacatcgcctgctgag
ccaatcccagggacgagtaaaggagagccgccaccctctacacgcacacctaaccatgtt
ggtacacaccttaacctcagcatcgaggtctcccctccctcacaggtggaccggtcagtg
ttggaggccttgcctgcagagttgagagaacaggtggagcactcctggacccacagacac
acagagagaacccacaacgggtcacaccaacacccccttcacccgtacccctcctcccct
ggcccctcttctcctctctcttcctgttcatcttcccctctaccctctcctgtaggagga
ctagtgattcagatccccaaccagcctggacagaccggctccacaggcatcatcctggaa
ctgcctgacttctcccaggttgacccagaggtgtttgcagcactccccagagaactccag
gaggagctgcgttcagcgtacggccgcagagagaacgcccaggcccaggggatcatggac
cagaggaaccccctgttgcatctgaagcatgtgggggtgggtcggatgaagcgctgctac
aagaatgccaacaatagccctgccaagaaaggcccctcccctctaaagaggccccgccca
ccaggaaacagcccggccaaagacctaccacacgtgctcagatccagggacctacccaat
ggcctcaagctggagactggaccttccacctcctccctacagcaggacgacccagagact
ctgtccaagttcacccctcgccctgaacccaccctcgctggagcctgtgatttcatggac
atccgaacactactcagagaatgggtcactaccatctcagaccctatggaggaggacatt
ctgcaggtagtcaagtactgcactgatctgatcaacgacaaaaatctagagaaacttgcc
ctgatcatcaagtacatgaagaggttgatgcagcagtctgtggagtctgtatggagcatg
gcctttgacttcatcctggacaacgtgcaggtggtggtacagcagacctacggcagcact
ctgaagatcacgtag

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