Salmo salar (Atlantic salmon): 106590148
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Entry
106590148 CDS
T04363
Name
(RefSeq) tripartite motif-containing protein 16-like
KO
K12006
tripartite motif-containing protein 16
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106590148
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
106590148
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
SPRY
zf-C3HC4_2
zf-C3HC4_3
U-box
zf-RING_6
zf-RING_2
Prok-RING_4
CCDC22_CC
zf-RING_5
Spore_III_AB
Fib_alpha
LMBR1
HAUS6_N
Y1_Tnp
TMCO5
Gp58
Exonuc_VII_L
DUF4455
Tli4_N
Motif
Other DBs
NCBI-GeneID:
106590148
NCBI-ProteinID:
XP_014036270
UniProt:
A0A1S3Q8G6
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Position
ssa29:complement(12499970..12517505)
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AA seq
560 aa
AA seq
DB search
MAQQGILLDQDQFCCSVCLDLLKEPVAIPCGHSYCRSCIEGCWDQDDLKGVYSCPQCRQT
FTPRPDLRKNNMLAEVVEKLKKTGLQAAPPDLCYAGPGDVACDFCTGTRKQKALMSCLVC
LVSSCKTHLQPHYSVPALKKHKLVKASTQLQENICSRHDELLKIYCRTDQNCICYLCMVD
DHKGHDTVSAAAERTEKQSQLGMSQQKLQQRIQEREKELKELQHAVESLKRSAQAAVEDI
DRIFTELIRSIERRCSEVKELIRDQEKAQVGQADGLLEQLEQEISELRRRNADLEQLSHT
EDHIHFLQSYQSLSSPSVSSDLPSIVIHPQYFGDVNKAVSDVREKLEDVLKGEWTKISTT
VNSVDVLLPPEPKTREQFLQYSCQLTLDPNTAQKSLSLSEGNRKVTVVKNVRDPNPDHPD
RFTGWWQVLCREGLSGRCYWEVEFHCGTGFIAVSYKDISRIGCVNDSRFGYNDKSWGLEC
SSNGFRYSYSFRHNNVETKVSGPQSSRVGVYLGHKAGILSFYSVSDTMTLLHTVETTFTK
PLYPGIWIRSVNDSAELCKL
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atggctcagcagggaattctgctggaccaggatcagttctgttgttctgtctgtctggat
ctactgaaggagccagtagctatcccctgtggacacagttactgtaggagctgtattgag
ggctgctgggatcaggatgatctgaagggggtctacagctgtcctcagtgcagacagacc
ttcactccaaggcctgatctgagaaaaaataacatgttggctgaagtggtggagaaactg
aagaagacaggacttcaggctgctccccctgatctgtgctatgctggacctggagatgtg
gcatgtgatttctgcactgggaccagaaagcagaaagccctcatgtcctgtctggtgtgt
ctggtgtcttcctgcaagactcacctccagcctcactatagtgtccctgcactaaagaag
cacaagctggtcaaagcctccacacagctacaggagaacatctgctcccgtcatgacgaa
ctgctgaagatttactgtcgtaccgatcagaattgtatctgttatctgtgtatggtggat
gatcataaaggccatgatacagtgtcagctgcagcggagaggaccgagaaacagagtcag
ctggggatgagtcagcagaagctccagcagagaatccaggagagagagaaggagctgaag
gagctccaacatgctgtggagtctctcaagcgctctgcacaggcagcagtggaggacatt
gataggatctttactgagctgatccgctccattgagagaaggtgctctgaggtgaaggag
ttgatcagagaccaggagaaggctcaagtgggtcaagctgatggactcctggagcaactg
gagcaggagatatctgagctgaggaggagaaacgctgatctggagcagctctcacacaca
gaggatcacatccatttcctccagagttatcagtctctctccagtcccagtgtctcttca
gacttacccagcatcgttatccatcctcagtactttggagatgtgaataaggctgtttct
gatgtcagagagaaactagaagacgttcttaaaggagaatggaccaagatctccaccaca
gtgaattcagtggatgttttactgcctccagagcccaagactagagagcagttcttacaa
tattcctgtcagctcacactggatccaaacacagcacagaaatccctctctctgtctgag
ggaaacaggaaggtgacagttgttaagaatgttagagatccaaatcctgaccatccagac
agattcactggttggtggcaggtcctttgtagagagggtctgtctggacgctgttactgg
gaggtggagtttcattgtggaactggttttatagcagtctcttataaagacatcagtaga
atagggtgtgttaatgattccagattcggatacaatgacaagtcttgggggttagagtgc
tctagtaatggttttcgttatagttatagtttcagacacaataatgttgagactaaagtg
tcaggccctcagtcctccagagtaggagtgtacctgggtcacaaggcaggtattctgtcc
ttctacagcgtctctgacacaatgaccctcctccacacagttgaaaccacgttcactaaa
cccctctatcctgggatatggattaggtccgtaaatgattctgctgagctgtgtaaactg
tag
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