Salmo salar (Atlantic salmon): 106602505
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Entry
106602505 CDS
T04363
Symbol
catsperb
Name
(RefSeq) cation channel sperm associated auxiliary subunit beta
KO
K16893
cation channel sperm-associated protein subunit beta
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sasa03037
]
106602505 (catsperb)
04040 Ion channels [BR:
sasa04040
]
106602505 (catsperb)
Cilium and associated proteins [BR:
sasa03037
]
Motile cilia and associated proteins
Sperm associated proteins
106602505 (catsperb)
Ion channels [BR:
sasa04040
]
Voltage-gated cation channels
Calcium channel, sperm-associated (CatSper)
106602505 (catsperb)
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Gene cluster
GFIT
Motif
Pfam:
CATSPERB
CATSPERB_2nd
CATSPERB_1st
DUF6133
Motif
Other DBs
NCBI-GeneID:
106602505
NCBI-ProteinID:
XP_014050658
UniProt:
A0A1S3RE72
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All DBs
Position
ssa01:complement(38528474..38571209)
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AA seq
1150 aa
AA seq
DB search
MEMNRPSIKGTQMIFIITILLVRVQFGTTISDTDEPDDPEQQKLFQCVSGNMDSKRVRLY
LGLDNLVVDCMLRKKPGVSARQYQNQLKLYTSSGLLPTMAIYNSTNSATFPFKLILNAST
WRVNVPRYNITINTVAAPVDEWYVEFSMFYAFSMFSSKGSILDTLKGTLLDVAREPILQW
TIGEELSSRIIEPHLHRVLKLQVSQSPCAGDVAVLAPVFAPGGHTGVILSVTRSAFTAQA
RWFNATRSLCSLINEACVSGCVGISIVDLKLTNCHLFLLTNRGLFISQDLLSPVTGTLNF
TLLFLPALAQMDYSATTLWFSSQCVTDRIYFSDDTLSLISNEGEGDNLHSRCVYSKYPFT
RWFLCQASAADIAKNHKHRYLSFLHDRHQHTGILLSHTEQKGAMVSVFGVKAEDLFQRHT
KFPPVILDFQPRGIFLLDNHVILYGSEVWTSSDRGSTFTWVFSLDNQIVIDALSCTVIGV
VVFFTDHGNLYIMKSGLARFAWLNETLDVASTLLCDHMGILIAVQLDKDKPSGFSYRNIE
IDHLIEKHEMGFDKALALQYITDHTVLLHENAVINDHANGNNRQGRNNPLTVAPASHFPP
NHVGKVIYFSDGGMVVITEVFRTHYLRGFSGAVVGEILEPIKGASLNAEPMQLYDLLVKK
GEPKGLIVTLQLKDLDPSQGFNLSHVGKAVVAPGFSSYLITGLLPSGSALAKPTMPALVL
PLTSHRSGEWLLFHSAGRGSWGMKEGPCRHALQSLDGVRNNALMRINVREELNFTFKAFM
SDYSLSMVYHKKFMRVVLTNPLAIRVTARHSWDDTNNHMLTLTAFSHLCKKGTTTVMVYI
PEASLLCRSSSFTFTLQNSCPEGLQIVYVSQQPISDHEWIYTDPVDHMDNKRLFNLPVNY
RPPSQLGVLIPTTDNIYNADPSHPRPRQHYPISTNSGRYKQCAGKRSAEECGCTDGLKVS
PLAINSDCRQRVLRLTFPVTNFNITLFLRRTNHADHPLCSPYFVIVTEVNNRTSWKVTGT
HATPTMDKMRQYLEDSLENNLYNPEGLQISLYGSELFHFRISVIPGVVLCDLVEEVQIYV
DEPPLAFPTQHLVNNMAAIILGGLLLFGFLLIYNSVAMPTTSSIKTLLKKHKPTISPTRT
QNSTMTQGHE
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaatcgaccttcaatcaaggggacccagatgatattcatcataaccattttg
ttagtcagggtgcagtttggaaccaccatatcagacacagatgaaccagatgacccagag
caacagaaactatttcagtgtgtgtcaggaaatatggatagcaaaagggttcgactgtac
ctcggcctggacaatctggtggtggattgcatgctacggaagaaaccaggcgtctcagct
agacagtatcagaaccaactgaagctctacacatcatctggtctcctgcccaccatggcc
atctataacagcactaactcagccaccttcccctttaaattaattttgaatgcatccacc
tggagagtgaacgtccccagatacaacattactatcaacacagtggcagcacctgtggat
gagtggtatgtggagttcagtatgttctatgccttctctatgttcagcagcaagggatcc
atcctggacacactgaagggaacactactggacgtggccagagagcccatcctgcagtgg
acgataggggaggagttgtcgtctcgtatcattgaaccacatctccaccgggtcctgaaa
ctacaggtcagccagagtccctgtgccggtgatgtggctgtgctggcacctgtcttcgct
ccaggaggacacacaggggtgattctcagtgtcaccagatctgccttcaccgctcaggca
cgatggttcaacgccacgagatcactatgcagcttgatcaatgaagcgtgtgtatctggc
tgtgtggggatctccatcgtggacctgaagctgaccaactgtcacctgttcctgctgacc
aaccgggggctcttcatcagccaggatcttctttcccctgtcacaggcactctcaatttc
accttgctgttcctccctgcactggctcagatggactactctgccaccaccttgtggttt
tcctctcaatgtgtgacagatcgcatctatttcagtgatgacacgctcagtttgatttcc
aatgaaggagaaggtgacaacctgcattctaggtgtgtgtacagtaagtaccccttcacg
aggtggttcctgtgccaggcctccgctgctgacatcgcgaagaaccacaaacaccgttac
ctgtccttcctccatgaccgccaccaacacactggcatactgctctcacacactgagcag
aagggtgcgatggtgtcagtgtttggtgtaaaggcagaggatctttttcaacgtcacacc
aagttccccccggtgattctagatttccagcccagagggatcttcctgttggacaaccat
gttatcctgtacggctcagaggtgtggacgtcgtcagacagaggctctaccttcacgtgg
gtgttctctctagacaatcagatcgtgatagacgcgctgagctgtactgtcattggcgtg
gtagtgttctttaccgaccatggaaacctctacatcatgaagtcaggtcttgccaggttt
gcgtggttgaacgagaccctggatgtagccagtactctactgtgtgatcacatgggcatc
ctgattgctgttcagctggacaaagacaaacccagtggctttagctacaggaacatcgag
atagaccacctcatagagaaacatgagatgggttttgacaaagccctggccctccagtac
atcacagaccacacagtcctgctccacgagaacgctgtcatcaatgaccatgctaacgga
aacaatcgccagggcaggaacaaccctctcaccgtggcacccgccagccacttcccacct
aaccacgtgggcaaggtcatctacttcagtgacggtgggatggtggtgatcacagaagtg
ttccggactcactacctgagggggttctccggggccgtcgtcggggagatcctggagcca
atcaaaggagcaagcctaaatgcggagcctatgcagttatatgacctgttggtgaagaag
ggggagcccaaggggctcattgttacactgcagctcaaagacctagatccatcccagggg
tttaatttgtcccacgtggggaaggctgtggtagcaccaggcttcagcagttacctcatc
acagggctgctgcccagcggcagtgccctagccaaacccaccatgccagccctagtgctc
cccctgaccagccaccggtcaggagagtggctgctcttccactctgcaggccgggggagc
tggggaatgaaggaggggccatgtcgtcacgccctgcagtcattggacggtgtgaggaat
aacgctctgatgaggatcaacgtcagagaagagctcaacttcaccttcaaggccttcatg
tccgactactctctgtccatggtgtaccataagaagttcatgcgtgtggttctgaccaac
cctctggccatccgagtcacagccagacactcctgggacgacaccaacaaccacatgctc
accctcactgccttcagtcacctctgcaagaagggaaccaccacagtgatggtatacatc
ccagaagcctctctgttgtgtaggtcctcctccttcaccttcacgctacagaactcctgc
cccgagggactccaaattgtctatgtctcccaacagccaatcagtgatcacgaatggatc
tacacggatccagtagatcacatggacaacaagaggctcttcaacctgcctgtgaactac
cggcctccctcccagctaggtgttttaatcccgaccacagacaacatctataacgctgac
ccaagtcatccccgtcccagacagcactaccccatctccacgaactctggtcggtataag
cagtgtgcagggaaaaggtcagcagaggaatgtggctgtacagacggactgaaagtctct
cctctagccatcaactctgactgcagacagagggtgctgaggctaacgtttcctgtgact
aacttcaacatcaccctgttcctgaggagaaccaaccacgctgaccacccgctctgctct
ccttactttgttattgtcacagaggtcaacaaccggaccagctggaaggtcacaggaacc
catgccacccccaccatggacaagatgagacaatatcttgaagacagtctagaaaacaat
ctctacaacccagaaggactgcagatcagcctttatggctctgagcttttccacttccgt
atctctgtcattcctggagttgtgttgtgtgacctggtggaggaggtacagatctacgta
gacgagcctccgctggcgttcccaacccaacacctcgtcaacaacatggcagccatcatc
ctgggaggcctgctgctctttggcttccttctcatatacaacagcgttgccatgccaacc
acgagcagcatcaaaaccctcctcaagaaacacaagcccaccatctctccaaccagaacc
cagaactctaccatgacacaaggacacgagtag
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integrated database retrieval system
