Salmo salar (Atlantic salmon): 106603292
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Entry
106603292 CDS
T04363
Name
(RefSeq) RNA-binding protein Musashi homolog 2-like
KO
K14411
RNA-binding protein Musashi
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
106603292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106603292
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
106603292
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
106603292
NCBI-ProteinID:
XP_014052234
UniProt:
A0A1S3RK95
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Position
ssa04:42049846..42345844
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AA seq
460 aa
AA seq
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MEGDGSQATSGSPNDSQHDPGKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKR
SRGFGFVTFADAASVDKVLAQPHHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSAN
TVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEGEDVVEKVCEIHFHEINNKMV
ECKKAQPKEVMFPPGTRGRARGLPYTMDAFMLGMGMLSEYGPTLLQHSPAHYSVPHGYPN
IVATYGRGYTGFAPSYSYQFPGQVLIMLPSHPHGDADGSLYSNQRAHAGEFHAVHCFPAT
AYGPVAAAVAAARGSGRGARGRGGYMAYPQNAGPGFPDYGFYSAPSDQRGAPCSFADYGS
LGPQAAQMLHSEHATSACNSPLQHLHSPDQFKSPGGNPPRPGGFPGANSPGPVAELYGPG
GQDSNVGNYISAASPQPGSGFGHSMAQSLSGGPGKTGRSF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagacgggagtcaagccacatctggaagcccaaatgattcacaacatgacccc
ggtaaaatgtttatcggtggcctcagttggcaaacctcaccagacagccttagagactat
tttagcaaattcggagaaataagagaatgtatggtgatgagagaccccacgacaaaacgt
tccagaggatttgggttcgttacgtttgcagatgctgccagtgtagataaagtcttagct
caaccacaccacgaattagactcaaagacgattgatcctaaggttgcctttccccgacgc
gctcaacctaagatggtcacaagaacaaagaaaatatttgtgggcggattgtcagccaac
acggtagtggaagatgtgaagcagtattttgaacagtttgggaaggtagaagacgccatg
ctcatgtttgataaaactactaacagacatagaggattcggctttgtaactttcgagggg
gaagacgtcgtagagaaagtctgtgaaattcattttcatgaaatcaataataaaatggta
gaatgtaagaaggcccagcccaaggaggtgatgttcccaccaggcacgcgagggagggcc
aggggtctgccctacaccatggacgccttcatgctggggatgggcatgctgagtgagtat
ggaccaacactactccagcacagtccagcacactactcagtcccacacggttaccctaac
attgtggcgacgtacggccgtggatacactggattcgccccgagctacagctatcagttc
cctggccaagtattgatcatgttgccttcccatccgcacggagacgcggacggcagttta
tattcaaatcaacgggcccacgctggagaatttcatgctgtacactgcttcccggcgacg
gcgtacggaccggtggcggcggcggtggcagcagcgcgtggctcaggtaggggggcccgt
ggaagaggcggctacatggcgtacccacagaacgcagggccaggctttcccgattacggg
ttttactctgcgcccagtgaccagaggggggcaccctgctcctttgcggactatggctcc
ctggggccccaggcggctcagatgctgcacagtgagcatgccacctccgcctgcaactcc
cccctccagcacctgcacagcccggatcagtttaagagcccagggggaaacccacctcgg
cctggaggtttccctggtgccaacagccctgggcctgtagccgaactgtacggccctgga
ggccaggactccaatgtgggcaactacatcagtgctgctagcccccagcctggctccggc
ttcggccacagcatggcacagagtctatctggtggtccagggaagacaggccgaagcttc
taa
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