Salmo salar (Atlantic salmon): 106603439
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Entry
106603439 CDS
T04363
Name
(RefSeq) nuclear envelope pore membrane protein POM 121-like
KO
K14316
nuclear pore complex protein Nup121
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106603439
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106603439
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
106603439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POM121
Motif
Other DBs
NCBI-GeneID:
106603439
NCBI-ProteinID:
XP_014052596
UniProt:
A0A1S3RK03
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All DBs
Position
ssa04:complement(55965159..55974973)
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AA seq
1166 aa
AA seq
DB search
MSPREKRFIAFSSLVFCSIVIFCLVVYYIPTFFYIAFILGVCCVACIYHSGESLNARLGP
HPRHGLTIPPVLRRWLPEIANGLPTAGRVRSRTVKGDVREPLVFTDQRRSESAIYRKAAG
HSDSFLFSPRDILMGSYIGKAESPPTVVGRPRAGANSRVNPNAREQLREILARPNHAVYT
PNKRLSFGREPLGMMGRFTITPQRHYPLQQTGTSSVGILPPAQWDGFRKKNILSPRNSPA
VHSPVTVKIARPDRNTTQSPFFDHLNSPGILGSPGLGAPADPCSRETVLSMLKESRKREV
DKEDDRSFTAGQKGKRRRHDSSGSAHSAFEPLLPNGAPTQLVPKPGTLKRGLNTMMEEST
MKKSRTSSISSVSCGLTPSGTLGSVRNSIRSSLSSSQGFAQRKKASTRSLSPLSSPGSSR
SQTPERASKKPREEDARSPSSASSTRSDKTLMDPAPTTEKLTPAPEVRVASDSAGSGKRK
RKIPLVSSRRGDQISLPPPPELGYTITVKDLDQEKKAALSQINTVLEECEKSAPVVTTSY
QPPVSSDPTPTLATLLASPLSISTSASVVAPIPVVNLDPVPSSIAAPVTTNHSANPLLES
LKMMRNNALASAAATTAAPAVSFVKALTPAPLVTSALQGETSLTAPQPTPTSSFQPAPTS
LSQPASTMSSAFIQVLSQVTKAPSSVPTLGGASLFGLANTLTAPSSSLAPTATTEITSSN
NPLLASVFKPIFGPATPATSAPESTPAVPTFKPIFGSATASAFGQPAATSAPSTASASAS
LLSGLTNSSTVAPAASLFTGVSSSTAPAPVPSVVPAAPPSVKSLFGNWSAPPAMTSATTI
APATGSTFQFGATSTTAPAPTLSSTAAATTSNNGFLFGAMTTTSAATQLAPPATAQGGFT
FGQAAATQNSTTPSFSGFGMATAATTTAAAPAIQSTFTFGKSSFDASAASAFPSATQAPA
AATAAANPFAFGSAGANPAPFAFGAAATTAASTFGTPTKLAFGASSTGFAFGNTAAAPAA
PAFGSATQTAGTLPASAPTFSFGGVSAQQAPATPVQPTTGGFNFSAAISGTQFGTPNLTT
QTPGFNFGAAASDKPAFGTSTPTFGQSTAAGPIPFGSPGTPVQGFSALAPSAFGSPSTPS
FSIGAGSKTSGARQRLQARRQHPRKK
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaagagagaagcggttcatagcgtttagctctctcgtgttttgttccatcgta
atattctgtctagttgtgtattatattccaacctttttttatatagcgttcattcttgga
gtttgttgcgttgcctgtatttatcacagtggagaatcactcaacgctaggttaggccct
catccacgccatggtctgactattccacccgtgctgcgacgctggttgccagagattgcg
aacggattacccacagcggggagagtcagaagtcgcaccgtcaagggtgacgttagggaa
ccgctagtatttaccgaccaaagacgttccgagagcgctatttatcggaaagccgcggga
cacagcgactcatttctgttcagtcctcgggatatactaatgggaagttacattgggaag
gcagaaagtcctcccacagttgttgggaggccgcgagccggtgcgaattcgcgtgttaac
ccaaacgcacgagagcaactgcgcgaaatattggcgcgacccaaccacgctgtttatact
ccgaacaaaaggctgtcattcgggagggagccccttggcatgatgggcaggttcaccata
actccccagcgccactaccccctccagcagaccggcacatcctctgtgggcatcctgccc
cctgcccagtgggacggcttcagaaagaagaacattctcagccctcgcaactccccggca
gtccacagtccagtcacagtgaagattgctaggccagatcgcaacaccactcaatcccct
ttctttgatcatttgaactccccgggaatccttggttctccaggcctgggggcccctgca
gacccctgctccagggagactgttctgagcatgctcaaagagagccgcaagagagaggtg
gacaaggaagatgacaggagcttcactgcagggcaaaagggcaaaaggaggcgccatgac
agcagtgggagtgctcactcggcatttgagccactgctgcccaatggagctcctacacag
ctggtgcccaagcctggtacgctgaagcgaggactgaacactatgatggaggagtcaacg
atgaagaagtcgcgcacctcctccatcagttctgtgagctgtggcctgacccccagcggc
accctgggttcggtccgcaactccatccgcagctccctcagctcctcacaaggctttgct
cagcggaaaaaggcctccacccgcagcctctcccctctctccagccctgggtcgtcccgc
tcccagaccccagagagagcctctaaaaagcccagggaagaagatgctcgctcgcccagc
tctgcgtcctcgacgaggtctgacaagacgttgatggacccagcacccaccactgaaaaa
ctgactccagcccccgaggtccgtgtggcgtcagactctgcaggtagtgggaaacggaaa
cgcaagattccgctggtgtccagtcgtagaggagaccaaatctctctgcctccacctcct
gagctgggctacaccatcactgtgaaagacctggatcaggagaagaaagccgctctcagc
cagatcaacacagtcctcgaagagtgtgagaaatctgctccagtagtgaccacatcttat
caacctcctgtgtcaagcgaccccacacccaccctggccaccctgctggccagccctctt
tccatatcgacatctgccagtgtggtggctcctatccctgtggtcaacctggatcctgtc
ccctcaagcattgccgcacccgtcaccaccaaccactcggccaaccccctcctggagtct
cttaaaatgatgaggaacaacgccctcgccagtgctgctgccaccactgcagctccggct
gtctcctttgtgaaagcattgactcctgcaccactggtgacttctgctctgcagggagag
accagcttgactgctcctcagcccacaccaacctcctcattccagcctgccccaacctcc
ctctcccagcctgccagcaccatgtcctctgctttcatccaggtgctgagccaagtcacc
aaggcccccagcagtgtccccaccctgggtggagctagcttgtttggtctggccaacaca
ctgacagccccttcctcctcactggcccccaccgccaccacagaaataaccagcagtaat
aatcccctcctggcctctgtgttcaagcccatcttcgggcctgcgaccccagccacctca
gccccagagagcacacctgctgtcccaacttttaagcccatatttggaagtgccacagcc
agtgcttttggacagccagccgctacctcagccccctccacagccagcgcatctgcttca
ttgctcagcgggctcaccaacagcagtacggtggcccctgctgcctccctgttcactgga
gtgtccagcagcaccgctcctgcccccgtcccctccgtagtgccagccgccccgccatct
gtcaagtctctgtttggaaactggagtgcgccgcctgcaatgacctctgccacgaccatt
gcccctgccacagggagtactttccagttcggcgccacctccaccacagctcctgcaccc
accctcagctccaccgcagccgccaccactagcaacaacggctttttgtttggtgccatg
accaccacctctgccgccactcaactcgcccccccagccaccgcccaggggggatttacc
tttggccaggctgcagccacccaaaactctaccaccccatccttcagtggctttggcatg
gccactgcagccactactactgctgcagcacctgcaatccagtccacgttcacgtttggg
aagtcgtcgttcgacgcctcagcagcatcagcgttccccagcgcgactcaggccccggct
gctgctactgcagcagctaatccttttgcatttgggtcagctggggccaaccctgccccc
ttcgcttttggtgcagctgccactacggcagcttctacgtttgggacccccactaagctg
gcatttggagccagctccacaggttttgcatttggcaacaccgcggctgccccagcagcc
cctgcctttggctctgccactcagactgccggcacactcccagcctccgccccaaccttc
tcgtttggtggtgtatctgcacagcaggcccccgctacccctgtccagccaaccaccgga
ggattcaacttcagcgcagcaatttcaggcactcagtttggaacacccaatctcacaaca
cagacaccaggcttcaacttcggggctgctgctagtgacaagccagccttcgggacgtct
acccctacttttggccagagcaccgctgcaggtcctatcccctttggaagcccaggaact
ccagtccaaggattcagtgctttggcaccctcagcattcggctctccatcaactccctcg
ttctccattggcgctggctccaaaacgtcaggggcacgccagaggctacaagcccgaagg
cagcaccccaggaagaaatag
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