Salmo salar (Atlantic salmon): 106606806
Help
Entry
106606806 CDS
T04363
Symbol
gtf2f1
Name
(RefSeq) general transcription factor IIF subunit 1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
106606806 (gtf2f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sasa03021
]
106606806 (gtf2f1)
Transcription machinery [BR:
sasa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
106606806 (gtf2f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
106606806
NCBI-ProteinID:
XP_014058638
UniProt:
A0A1S3S359
LinkDB
All DBs
Position
ssa06:complement(21803973..21818565)
Genome browser
AA seq
539 aa
AA seq
DB search
MTSLGGSSSSSTEYIVRVPKNTSKKYSIMAFNSGDKVNCSSWTQARMERDMSNRRMYGVE
ETEEGAAGSEFGKKQREEARRKKFGIVTREFKVEDQPWILKVNGKAGKRFKGTKKGGVTE
NASYYIFTQCPDGAFEAFPVNGWYNFVPQAKHRTLTAEEAEEEWGRRNKVVNHFSIMLQR
RLREQERGPDDDDEEGEKGGKKKKKKGGRGGDLRIHDLEDDLELSSDESDSSGGEDGDSK
PKKKEGDVKGKGKKKKKKRGSDSEANEDSDDGDFEGLEVDYMSDESSSEEEAGEEKAKSN
KEAVPKGIDEASESEEESEEEKQNEEEGKEEEEEEEGKKTPVQTKKKRDSSGESDTSEDS
DIDGEAASALFMVKKRTPPKRGGGRGSGGSSRTGSRPGTPSIDSASTSNTLRAAASKLEQ
GKRQVVGGSSESPAAKRLKMESSSTAVTTQSPAPSGKSTPQPPSGKSTPSSSDVQLTEEA
VRRYLIRKPMTTKDLLKKFQTKRTGLSSEQTVNVLAQILKRLNPERKNVNDKMHFYLTE
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcactggggggcagcagttcctcttctacagagtacatagtccgggtccccaag
aacaccagtaagaagtacagcatcatggcctttaactctggggacaaagtcaactgctcc
tcctggacccaggctcgtatggagcgggacatgagtaacaggaggatgtatggtgtggag
gagactgaggagggggcggcaggcagtgagtttgggaagaagcagagggaggaggcacgc
aggaagaagtttggaattgtcacgagggagttcaaggtggaggaccaaccctggatcctc
aaggtcaacggcaaggcagggaagaggttcaagggtacgaagaaagggggcgtaacggag
aatgcgtcctactacatctttacccagtgtcccgacggggcctttgaggccttccccgtc
aacggctggtacaacttcgtgccccaggccaaacaccgcacgctgaccgccgaggaggcc
gaggaggagtggggcaggaggaacaaggtggtgaaccacttcagcatcatgctccagagg
cgcctgcgggagcaggagagggggccggacgatgacgacgaggagggcgagaaggggggg
aagaagaaaaagaagaagggaggaagaggaggggacctgcgcatccatgacctggaggat
gacctggagcttagcagtgatgagagtgacagcagcggaggagaagatggagacagcaag
cccaagaagaaagagggggatgtgaaggggaaggggaagaagaagaagaagaagagggga
agtgacagcgaggctaatgaggacagtgacgatggagactttgagggcctggaggtcgac
tacatgtcagatgagagcagttcagaggaagaggccggcgaagagaaggccaagtccaat
aaagaggccgttcccaaaggaatcgacgaggcatcggagagtgaggaagagagcgaggag
gagaaacagaatgaggaagaggggaaagaggaggaggaggaagaggaagggaagaagacc
ccagtccagacgaagaagaagagagacagcagcggtgagtcggacacttcggaggacagc
gacatcgatggagaggcagcctccgctctcttcatggtgaagaagcgtacacctcctaag
cgcggtggtgggcgtggctctggaggcagctccaggactggcagtcgccctggaacaccg
tccatagactccgcctccacctccaacacactccgagccgccgctagcaaactggagcaa
ggtaagagacaggtggtgggtggtagctctgagtctccagctgccaagaggctgaagatg
gagtccagcagtacggctgtcaccacccagagtcctgccccctcagggaagagcacgcca
cagcccccctcaggcaaatcaacccccagttccagtgacgttcagctgacggaggaggcg
gtgcgccgctacctgatccggaagcccatgaccaccaaggacctgctgaagaagttccag
accaagaggactggcctgagcagcgagcagacggtcaacgtcctggcccagatcctcaaa
cgcctcaaccccgagaggaagaacgtcaacgacaagatgcacttctacctcaccgagtaa
DBGET
integrated database retrieval system
