Salmo salar (Atlantic salmon): 106611484
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Entry
106611484 CDS
T04363
Name
(RefSeq) RNA-binding protein 25-like
KO
K12822
RNA-binding protein 25
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106611484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106611484
Spliceosome [BR:
sasa03041
]
Complex A
U1 snRNP components
U1 related factors
106611484
Complex B
106611484
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
106611484
NCBI-ProteinID:
XP_014067198
UniProt:
A0A1S3SS74
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Position
ssa09:complement(48162670..48187868)
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AA seq
678 aa
AA seq
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MSYPPHLNRLPQLPPGICPPQFAGFPQGVPAGTPMIPVHMGIMTSAPAVLVPTTVSMVQM
PPAPRKELNPVRLKENEEGGGGGPTTTVFVGNISEKASDMLVRQLLAKCGLVLSWKRVQG
ASGKLQAFGFCEYKEPESTLRSLRLLHELLLGDKKLLVKVDAKTKAQLEEWKAKKKIANG
FRDDTRRAKEEEDEEEVLDEDTKRRDQIVKGAIEGLIREYGSELNAPSQDGDNQPRKKKR
EKKEEEDINVMDMEDDKRDLISREISKFRDTHKKLEEEKGKKEQERQEIDKDRRERDKER
ERERERRDREREKEREKEKERNDNNKERERDRERIDRDRERTRERGDRGERERVKERSRE
VSKDRSRSRERSRDEKKHEREEDQEEAYERRKLERKMRDKEVAYQERLKNWEMRERKKAR
DYDKENQREDERRREMTKEGKRLKEFLEDYDDDKDDLKYYRGSALQKRLRDREKETELDE
RDRKREKEEHDQIRQRLLAEGHPDPEAELQRMEEEAERRRQPPVKPEPEEEVPQEKPNRE
REHREREHREREHREREHREREHHRDRRGGGGGADRPPLQQLQPQSDDDLEEGEELDDCD
REDSSDARPNPNLKPTMRPITSAPSVSSGSGGATPNSPGNESPCGIIIPHENSPEARPTE
EQHPKIGLSLKLGELKLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtacccccctcacctgaaccgcctcccccagttaccccccgggatttgccctccc
caattcgcggggttcccccagggagtcccagcaggtacgcccatgattccagtccacatg
gggattatgacctctgcacccgctgtcctggttcctaccacagtgtctatggtccagatg
cctcctgcccctaggaaggaactgaacccagtcagactcaaggagaacgaggaggggggc
ggtggaggccccaccactacagtgtttgtagggaacatctcagagaaggcttcagacatg
ctggtcagacagctgttagcgaaatgtggcctcgtcctgagctggaagagggtccaagga
gcttctgggaaactgcaagcgtttggtttctgtgagtacaaggagccagagtccaccctg
cgttccctgcgtctgctacatgagctgttgctgggagacaagaagctgctggtcaaggtg
gatgctaagaccaaggcccagctagaagaatggaaggctaagaagaagatcgccaacggg
ttccgggacgataccagacgggcgaaggaagaagaggatgaggaagaggttcttgacgaa
gacacaaagcgtcgtgaccagatagtaaaaggggcgatcgaggggttgatccgggagtac
ggcagtgagctcaacgccccttctcaggacggggacaaccagccccgcaagaagaagaga
gagaagaaagaggaggaggacatcaatgtgatggacatggaagatgacaaaagagacctg
atttccagagagatcagtaaattcagagacactcacaagaaactggaggaggagaaggga
aagaaagagcaggaacggcaagagatcgataaggacaggagggagagggacaaagagagg
gagcgagagagggagcgccgggaccgcgagagggagaaggagagagagaaggagaaggaa
cgaaacgacaacaacaaggagagagagcgggacagagaacggatcgatcgggaccgtgaa
cggacgagggagaggggagacagaggagagagggagcgcgtgaaggagaggagtcgagaa
gtcagcaaagaccgcagtagatccagagaacggagccgcgatgagaagaaacacgaacgc
gaggaggatcaggaggaggcgtacgaacgcaggaaattggagaggaagatgagggacaag
gaggttgcctaccaggaacgtctgaagaactgggagatgagagagaggaagaaggctcgg
gactacgacaaagagaaccaacgagaggacgagagacggcgtgagatgacaaaagaaggc
aagcgtctgaaagagttcctggaagattatgacgatgacaaagacgacctgaaatactac
aggggtagtgctttacagaagcgtctgagagaccgtgagaaggagactgagctggatgag
agagacaggaagagggagaaggaggagcatgatcagatcagacagagactgttagctgag
ggacacccagaccctgaggccgagctgcagaggatggaggaggaggcagagaggaggcgg
cagcccccagtgaagccagagccagaggaggaggtgccgcaggagaaaccaaaccgagag
agggagcaccgagagagggagcaccgagagagggagcaccgagagagggagcaccgagag
agggagcaccacagggacaggagaggaggaggaggaggagcagacaggcctcctctccag
caacttcaaccccaatcagacgatgacttggaggagggggaggagcttgatgattgtgac
agggaggactcgtcagatgccaggccaaacccaaacctgaagcccacgatgcggccaatc
acatcggccccctcggtgtcgtcgggcagcggcggcgccacacccaactcccccggcaac
gagtctccctgcggcatcatcatccctcatgaaaattctcctgaagcccggcccaccgag
gaacagcatcccaagattggcctcagcctcaaactgggtgagttaaaactagattga
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