Salmo salar (Atlantic salmon): 106611515
Help
Entry
106611515 CDS
T04363
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa03013
Nucleocytoplasmic transport
sasa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
106611515
03015 mRNA surveillance pathway
106611515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sasa03019
]
106611515
Messenger RNA biogenesis [BR:
sasa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
106611515
mRNA cycle factors
P-body specific factors
106611515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
106611515
NCBI-ProteinID:
XP_014067272
UniProt:
A0A1S3SSF5
LinkDB
All DBs
Position
ssa09:complement(51606662..51611250)
Genome browser
AA seq
456 aa
AA seq
DB search
MKDDKENTRQREKRMEIKCENIEKTEKPKQEKKELMTKIIIRRLPPSITKEELEVQLQPL
PEVDYLEFFSNDSSMYPHVFARAYINFKIQEDIVLFRDRFDGYVFVDNGGQEYPAIVEFA
PFQKIAKRRSKKKDAKSGTIDEDADYKKFLEIYNGDDEKFTSTPETLLEEIEAKTKELVA
KKMTPLLDFLKNKQRIREEKREERRRRELDRKRLRDEERRRWREEDRRKRKEAEKFKKGD
KPSEKDKDQAKEVPKIKLLRKPDRGDDVEKPKEKLKKPEKDKMKDDRAPGCPDMTKRQNF
ETREDRVSRKADEDGHKDFRERDVERDRNHEQDKERERRQKEKERIRRQDEDRRRRRERH
DGENSYRKREEEGKKKKGDRVWEKRRGENAGDSASHTDKPKKSEETLREEKAKRDCLRNK
DRPTIQLYQPGARNRGGESHPGERKLDRDQEKGVEG
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacgataaggaaaatactcgtcagagggagaaaaggatggagataaaatgcgaa
aacattgaaaaaacggagaagccaaagcaggagaagaaagaattaatgacgaagatcatt
atccgacgtctgcctccaagcataaccaaggaggaactggaggtgcaattgcagccactt
ccagaagtggactacttagaatttttctccaatgacagcagcatgtacccccatgtcttc
gccagagcatacatcaacttcaagattcaggaagatattgtacttttcagagaccggttt
gatggatatgtgttcgttgataatggagggcaggagtatccagccattgttgaatttgct
ccttttcaaaagattgccaaaagaaggagtaagaaaaaggatgctaaaagtggaacaata
gatgaagatgctgactacaagaaattcctggagatttataatggcgacgatgaaaagttt
acatccacccctgagactctactggaggaaatagaggcgaaaacaaaggaactagtagct
aagaaaatgactcccctcttggacttcttaaagaacaaacagagaatccgtgaggaaaag
agagaggaaaggaggagacgagaactcgaccgtaaacgcctgagggacgaggaacgtcgc
aggtggagggaggaggacaggagaaagcgcaaagaagcagagaagttcaagaaaggagac
aaaccttccgagaaggataaagaccaagcgaaggaggtgccaaaaatcaagctcttgaga
aaaccagacagaggagatgatgtggagaagcctaaagagaagttaaagaaacctgagaag
gacaagatgaaagacgacagagctccagggtgtcctgatatgacaaaacgccaaaacttc
gaaaccagggaggatagggtatcgcggaaagctgatgaagatggacacaaagacttcaga
gagcgtgacgtagaaagggacagaaaccatgaacaagacaaggagagggagcggcggcag
aaagagaaggagcgcatcagacgacaagacgaggatcgacgaaggaggagggaaaggcac
gatggagagaactcctacagaaagcgagaggaagaagggaaaaagaagaaaggagatcgt
gtctgggaaaagagaaggggcgagaatgccggggactccgcaagccatactgataagcct
aaaaagtcagaagaaaccctgagggaggagaaagctaaaagagattgtttaagaaacaag
gatcggcctaccattcagctataccagccaggtgccaggaaccgaggaggagaatctcat
cctggggagcgaaagttggatcgagaccaagagaagggagttgaaggataa
DBGET
integrated database retrieval system
