Salmo salar (Atlantic salmon): 106612035
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Entry
106612035 CDS
T04363
Symbol
rbfox3
Name
(RefSeq) RNA binding protein, fox-1 homolog 3
KO
K14946
RNA binding protein fox-1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sasa03041
]
106612035 (rbfox3)
Spliceosome [BR:
sasa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
106612035 (rbfox3)
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
106612035
NCBI-ProteinID:
XP_014068315
UniProt:
A0A1S3SVF4
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Position
ssa01:complement(95872093..96606170)
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AA seq
391 aa
AA seq
DB search
MDTPSWAETKPGTGLCKQQGTIALFGNVVYSGLLNEHIWHFGVPVVTRLGNQEAPAPPEA
MAQPYPPAQYPPPPQNGIPAEYTAPHPPHPHPPADYTGQSAVAEHALTLYAATQTHSEQP
GNENNTPTLTATTVSQAEEVAQTEGSHQLHLQQCDSSEKQQPKRLHVSNIPFRFRDPDLR
QMFGQFGKILDVEIIFNERGSKGFGFVTFETSADADRAREKLNGTIVEGRKIEVNNATAR
VMTNKKVSNPYTNGWKLNPMVGAVYGPELYAVAGFPYPSTGATVAYRGAHFRGRGRAVYN
TFRAAPPPPPIPAYGAVVYQDGFYGAEIYGGYAAYRYAQPAATAATAYSDSYGRVYATAD
PYHHTIGPAATYSVGTMASLYRGGCSRFTPY
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggatacccccagctgggcagaaaccaaaccaggaactggcttgtgtaagcagcaggga
accattgctctttttggcaacgtggtgtacagcggcctgctcaacgagcacatctggcat
ttcggggtacctgtcgtcaccagactgggtaaccaagaggcaccagccccccctgaagcg
atggcccagccctacccaccagcccagtacccccctcccccccagaacggtatcccagca
gagtacactgccccgcaccctcctcacccccacccgccggcagactacacggggcagagc
gcagtggctgagcacgccctaacgctgtacgcagccacacagacacacagcgaacaaccc
ggcaatgagaacaacacacccaccctcaccgccactacagtatcgcaggcagaagaggtt
gcgcaaacggagggctcccatcagctccacctgcagcagtgtgattcatcagagaagcag
cagcccaaacggttacatgtctccaacatccctttccgcttcagagacccagacctcagg
caaatgtttgggcaatttgggaagattttagacgtggaaataatttttaacgagcgaggt
tccaagggttttgggtttgtaacatttgaaacgagtgcagatgcggaccgtgcgcgggag
aaactaaatggtacaatcgtagagggacgcaaaatagaggtcaacaacgcaacagcaaga
gtaatgacaaacaaaaaggtgtcaaacccttacacaaacggctggaagctgaatcccatg
gtgggagctgtctatggtcctgaattgtatgcagtggcaggttttccctaccctagtaca
ggagcgacggtagcctatcgcggagctcatttcagaggaagggggcgggccgtctacaac
acattccgtgccgcgcccccacccccacccatccctgcctatggagctgttgtttaccag
gacggcttctatggtgcagaaatatacggaggttatgcagcatacagatacgcccagcca
gcagccacggctgcaaccgcatacagcgacagttacgggagagtctatgcaacagcagac
ccatatcaccacacgattggtcctgcggccacgtacagtgtgggtactatggctagccta
tacagaggaggttgcagtcgcttcactccctactag
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