Syntrophus aciditrophicus: SYN_00295
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Entry
SYN_00295 CDS
T00346
Name
(GenBank) glycogen debranching enzyme/alpha-amylase
Organism
sat
Syntrophus aciditrophicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDE_C
GDE_N
Alpha-amylase
GHL6
Glyco_hydro_77
Motif
Other DBs
NCBI-ProteinID:
ABC78593
UniProt:
Q2LWY3
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Position
2734824..2739095
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AA seq
1423 aa
AA seq
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MNAILTQSPAPGKHLLRFCGDLVSFSLSVPAEMEGTAFVRTNLGHAHITRREIIRQVEYN
EPLLGRDWFDIPMKAVGPGRFEAVLALTEVGHFEAKCLFIPAGRPEPLWPPGNNTVINSE
PADTCCGNIIYNAFIRQFGPYKTMARAEAGPVDTIKTLDHAGYTVIPPSGTFRDLIAELD
FILNRLGCRILQLLPIHPTPTTYARMGRYGSPYASLSFTAVDAALAVFDPSATPVEQFLE
LVDGVHARHGKVIIDIAINHTGWAASLHESHPQWLARNEKGEIEAPGAWGVVWEDLTRLD
YSHKDMWAYMADVFLTWCRRGVDGFRCDAGYMVPVPAWRYIIAKVREQFPDTVFFLEGLG
GKISVTRELLSQGNFNWTYSELFQNYERNQIEWYLPETIEVSAGEGITVHFAETHDNPRL
AATSLTYARMRTALCALLAPHGAFGFANGVEWFAAEKINVHEPCALNWGAEENQVDAIAR
LNVILKTHPAFGPSVDLSLIGRGQGNFIALLRDHRNSGRKVIIVANLNCSATVTAQWHRS
HASFAGNSAVDLLTEENIPLQSSDSQTSGIDLAPGQVRCLTSPDDPWLAQSHLDPGVIPP
RVIRQRLRAKALEAMAGFSTELTMEPDAAAELLTADPSDFCRRLNRESDASRVVNWQFPS
DLRRQVMIPPGHFILFRADHPFRIRIIENGRIRATEQSLNDKNDRPFILLAPLKAQNGHK
LLTVEITRHTPQGSVHNTGTLLFLADGLDARVRTSFSRNDCHRMPLLALDTNGRGAMMRV
HADWWNLRSRYDALLAANLNPDFPEDRRILLTRCRAWVVFQGYSADVNLDCLARFGFDFQ
KGAWWRYRIPTGQGEHIVLQITLSMADDAANTVRLTARRLARIEAQQELDDSKPVTLIIR
PDIEDRNFHFTTKAFTGPEQSWPKAVSAGTDGLTFAPCPDYGLTMRIDSGRFVSEPEWYY
MVHRSLEAERGLDPDSDLFGPGYFTCELRGGAHVTLTARAQTGRAVSESSPKVPAFTVWT
PDEGGLSLEQALNSALEHYVVRRGNFRTVIAGYPWFLDWGRDTLIVVRGLVAAGQIETVK
DVLLQFARFEADGTLPNMIRGRDAGNRDTSDAPLWFFTACADLVAAEGHDHFLESDCNGR
TVRQVLADMATSIMTGTPNGIIMDPASGLLFSPAHFTWMDTNFPAGTPRQGYPIEIQALW
FAALKFLSRVHQEKRRWQDLADKVQAGIQALFWNPEAGYLADCRHAVPGQSALLAEPDDA
LRPNQLLALTLGAVSDPEIRRSVLKACGELLVPGAIRSLADRPVRLPLEIRHQGQLLNDP
WRPYWGRYSGDEDTRRKPAYHNGTAWTWLFPSFCEAWLDCYGPAEKATARSWLSSSLLLI
NSGCVGHVPEIADGDAPHTQRGCDAQAWGVSELLRVWKKLDSA
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgattcttacccaatccccagcgccggggaagcacctgctgcgcttctgcggc
gacctcgttagtttttcactcagtgtaccggcagagatggaagggacggcttttgtccgc
accaacctgggacacgcccatatcacccgcagggaaatcattcgccaggtggaatacaat
gagccccttctgggacgcgactggttcgacatccccatgaaggccgtggggcccggacgt
ttcgaagccgttctggcactcacggaagtcggccatttcgaagccaagtgcctgtttatc
cccgcaggtcgaccggaaccgctctggcctcccgggaacaatacggtcatcaactcggag
ccggctgacacctgctgcggaaatatcatctataacgccttcatccgccagttcggccct
tacaagacgatggccagggccgaggccggccccgtcgatacgatcaaaaccctggaccat
gccggatacaccgttatcccgccgtcgggaaccttccgggatctgatcgcggaactggat
tttatcctcaatcggctgggctgccgcattctccagcttctgcctattcaccccactccc
acgacgtatgcgcgaatgggacgatatggcagtccctatgcgtccctgagtttcaccgcc
gtggatgccgcgctggcggtttttgatccgtcagccacgcccgtggagcagtttctggaa
ctggtggacggggtccacgcccgccacggcaaagtgatcatcgatatcgcgatcaatcac
accggctgggcggccagcctgcatgaaagccatccccagtggcttgcccgcaacgagaag
ggggaaattgaagcccccggcgcctggggagtggtctgggaggacctgacccgcctggat
tacagccataaggacatgtgggcttacatggcggatgtctttctgacatggtgccgcaga
ggggtggacggcttccgttgcgacgcgggctacatggttcccgtaccggcctggcggtac
atcatcgccaaggtgcgggagcagtttcccgacaccgtctttttcctggagggtctgggt
gggaaaatttcggttacgcgagaactgctcagccagggcaatttcaactggacgtactcc
gagctgtttcagaattatgagcgcaatcagatcgagtggtatcttcccgaaacgatcgag
gtgtcggccggtgaagggatcacggtccatttcgccgaaacccacgacaacccgcgcctg
gccgccacatctctcacctacgcgcgcatgcgcacggccctgtgcgccctgctggcgcct
cacggggccttcggcttcgccaacggcgtggaatggttcgccgcggaaaaaatcaatgtc
cacgagccctgcgccctgaactggggagcggaagaaaaccaggtggatgccattgcccgg
ctgaatgtcatcctgaaaactcatcctgcctttggcccctccgtggatctgtcgctgatc
ggccgaggccagggaaacttcatcgccctgctgcgcgaccatcgaaattccgggcggaag
gttatcattgtagccaatctgaattgcagcgctacggtcaccgctcaatggcacagaagc
catgcctcctttgccggaaattcagcggtggatctgctcaccgaagagaatattcctttg
cagagttccgacagccagacctccggcatcgacctggcccccggtcaggttcgctgcctg
acttcgccggacgatccctggctggctcagtcccatctcgatcccggcgtcatccccccc
cgggtgatccgccagcgcctgcgtgccaaggcactggaagcgatggcgggtttcagcacg
gaacttaccatggagcccgatgctgcggcggagctcctgacggctgacccgtcagatttc
tgccgtcgtctcaatcgggaaagcgacgcttcgcgggtcgtgaactggcagtttccctcc
gatctgcgacggcaggtgatgatcccccccggtcacttcatcctcttccgcgccgatcat
cccttccgcatccgcattatcgaaaacggacgcattcgggccaccgaacagagcctcaac
gataaaaacgaccgtccgtttattctgctcgctcccctgaaagcacagaacggccacaag
ctgctgaccgtggaaatcacccgtcacactcctcaaggcagcgtccacaacaccggcacg
cttctttttctcgccgacggtctcgatgcgcgcgtccgcacatccttttcgcgcaatgac
tgccatcgaatgcccctgctggctctggataccaacggccgcggcgccatgatgcgggtg
catgccgactggtggaacctgcgaagccgctacgacgccctgctggccgccaatctgaat
cccgattttccggaagaccggcgaatcctgctgacccgctgccgggcctgggtcgtcttt
cagggatattccgcggacgtcaatctggattgtctggcccgcttcggttttgattttcaa
aaaggggcctggtggaggtatcgcatccccacggggcagggcgagcatatcgttctgcag
atcaccctctccatggccgatgacgcggccaacaccgtccggttgaccgcccggcgactg
gcccgcatcgaagctcagcaggagctggacgactcaaagccggttaccctgattatccgg
ccggacatcgaggaccgtaatttccacttcaccaccaaagccttcaccggcccggaacag
agctggccgaaagcggtcagcgccggcacagacggactcacctttgccccctgtccggat
tacggccttactatgcggatcgactcgggccgtttcgtcagcgaaccggaatggtactat
atggtccaccgctccctggaggccgagcggggtctggacccggacagcgacctcttcggc
cccggctacttcacctgcgaattgcggggcggcgctcatgtcaccctgaccgcccgggca
caaaccggccgggcagtttcagaatcgtccccgaaagtgcccgccttcaccgtctggacg
cccgacgaaggcggattgtctctggagcaggcgctgaactccgccctggaacactatgtg
gtgcgccggggaaacttccgcacggtaatcgccggatatccctggtttctcgactgggga
cgggacaccctgatcgttgttcgcggcctggtggctgcgggacagatcgaaacggtcaag
gacgttttactccagttcgcccgttttgaggccgacgggacccttcccaacatgattcgc
ggcagggatgcaggcaaccgcgacacctcggacgcccccttgtggtttttcactgcctgc
gcggacctggttgcggccgaaggccatgatcatttcctggaaagcgactgcaacggacga
accgtccgtcaggtcctggcggacatggcgacgtccatcatgacgggaacgcccaacggc
atcatcatggatcccgcctcgggcctgcttttcagcccagcgcactttacctggatggat
accaatttcccggccggcaccccccggcagggctatcccattgagattcaggccctctgg
tttgcggccctgaaatttctttcccgcgttcatcaggaaaaacggcgctggcaggatctg
gccgataaagttcaggccggcattcaagccctcttctggaatcccgaagcaggttatctg
gcggactgccgtcacgccgttcccggacagagcgcgcttctggccgaacccgacgacgcc
ctgcgccccaatcagctgctggccctcaccctgggggcggtcagcgacccggaaatccgc
cgctcggtcctgaaagcctgcggggagctgctcgttcccggagccatccgcagcctggcc
gaccgtcccgtgcggctgcccctggaaatccgccatcaggggcagcttctcaacgatccc
tggcgcccctactggggccgctactccggtgacgaagatacgcgccgcaaaccggcctat
cacaacggcacagcctggacatggctcttcccttccttctgcgaagcctggctggactgc
tacggtcccgccgaaaaggcgaccgcccgatcctggctgtccagcagccttctgctgatc
aacagcggctgcgtgggtcacgtcccggaaatcgcggacggcgacgccccccatacccag
cgaggctgcgatgcccaggcctggggagtcagtgaactgctgcgggtttggaaaaaactg
gattcggcttga
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