Syntrophus aciditrophicus: SYN_00608
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Entry
SYN_00608 CDS
T00346
Name
(GenBank) oligopeptide-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sat
Syntrophus aciditrophicus
Pathway
sat02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sat00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SYN_00608
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sat02000
]
SYN_00608
Transporters [BR:
sat02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SYN_00608
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ABC78250
UniProt:
Q2LVZ1
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Position
2416303..2418081
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AA seq
592 aa
AA seq
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MRHTVNTATCSFGSLPDEDSRRAKEMTESVEFHCKKNGSEILSPSMKSSFFRFLLIGILL
VGGFTGCGETDSSPQQARQQAPGTPAYGDIIVEGSIGDASNLIPLLSSDSTSHEIAGLVY
NGLVKYDKNLKITGDLAESWGISPDGLIITFHLRHNVRWHDGHPFTAEDVLFTYQLTIDP
KTPTAYAGDFLKVKKAEVLDAHTFRVTYDKPFAPALMSWGSAIMPKHLLAGQDITRTPLA
RKPVGTGPYKFKEWVAGQKIVLVSNPDYYEGRPYIDGYILRIIPDMATMFLELRAGGIDR
MGLTPLQYTRQTENPLFRKNYNKFRYLSFAYTFVGYNLGNPLFADRRVRQALAYAIDKEE
IIQGVLLGLGKPATGPFKPGTWAYNPNVPTFPHDPGKARALLAEAGWLDRNGDGILDRNG
QPFAFELLVNQGNEVRAKCAEIIQRRLAEIGISVKIRVVEWAAFVNDFINKRRFDATILG
WTIPLDPDLYDVWHSSKTGPQELNFTSFKNEEVDRLLEKGRGTFDLNERKRCYDRIQEIL
AEEQPYTFLYVPDALPIVQARFRGIELAPLGIGHNFIKWYVPAPEQRFIMTR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgagacacaccgtcaatacggcaacctgttctttcggatcgcttccggatgaggatagc
cgcagggcaaaggaaatgacggagtctgttgaattccattgcaaaaaaaacggctctgag
atactttccccatccatgaaatcctcttttttccgcttccttttgatcggcattcttctc
gtcggcgggtttaccggatgcggcgagacggacagcagtccccagcaggcccgacagcag
gcgccaggcaccccggcttatggcgacatcatcgtggaaggttccatcggggacgccagc
aacctgatccccctgctctcctccgattcaacttcgcatgaaatcgccggtctggtttac
aacggccttgtcaaatacgacaaaaatctgaaaattaccggtgaccttgccgaatcctgg
ggaatttcccccgatgggctgatcatcaccttccatctccgtcacaatgtccgctggcac
gacggtcatcccttcaccgccgaggatgtccttttcacctaccagcttaccatcgatccc
aaaacgcccacggcctacgccggagactttctcaaggtaaagaaggcggaagtgctcgac
gcccacaccttccgggtcacctacgacaagcccttcgcccccgccctgatgagctggggc
agcgccattatgcccaagcatctcctggccggtcaggacatcacaaggacgcccctcgcc
cggaaacccgtcggaacgggcccttacaaattcaaggaatgggtggccggacagaagatc
gtgctggtctccaatccggactactatgaaggcagaccctacatcgacggctacatcctg
cggattatccccgacatggccaccatgttcctggaactgcgcgccggcggcatcgaccgg
atgggcctgacgccgctccagtatacgcggcagacggaaaaccccctgttccgcaagaat
tacaacaagttccgttatctctcctttgcctacacctttgtcggctacaacctcggaaat
ccccttttcgctgaccgccgggttcgtcaggccctggcttatgccatcgacaaggaggaa
atcatccagggtgttctgctgggcctggggaaacctgccaccggcccttttaaaccgggg
acctgggcctataatccgaatgtcccgaccttcccccacgatcccggaaaggcccgcgcc
ctgctggccgaagcaggctggctggatcgcaacggcgacggcatcctggacagaaacggc
caacccttcgcctttgaactgctggtcaaccagggcaatgaggtccgggccaagtgcgct
gaaatcatccagcgccgtctggccgagatcggcatttccgtcaagatccgggtggtggaa
tgggccgcctttgtcaacgacttcatcaacaaacggcgctttgacgccaccattctggga
tggacgattcctctggaccccgatctctatgacgtctggcattccagcaagaccggtccc
caggaactgaatttcacgtcattcaagaatgaggaagtggaccgcctcctggaaaaggga
cgcggcaccttcgatctgaacgaacgcaaaaggtgctacgaccggatacaggaaatcctg
gcggaagaacagccttacacctttctttatgttcctgatgccctgcccatcgttcaggcc
cgtttccggggcattgaactggcacccctgggcatcggccacaatttcatcaagtggtac
gtccctgctccggaacagcgattcatcatgacccggtaa
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