Syntrophus aciditrophicus: SYN_01127
Help
Entry
SYN_01127 CDS
T00346
Name
(GenBank) RTX family of calcium-binding proteins
Organism
sat
Syntrophus aciditrophicus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Cadherin_3
PKD_4
PKD
SdiA-regulated
Motif
Other DBs
NCBI-ProteinID:
ABC76279
UniProt:
Q2LPS1
LinkDB
All DBs
Position
400384..403575
Genome browser
AA seq
1063 aa
AA seq
DB search
MPLEGSCRRDAEMKATRYFLAVLAALFAFSGFFAPAVLAAETVTAVLERITLTSEFSPPS
PDPAGIVYLSDYNTLLISDCEVDEMPPYFTGKNLFEATLGGSLLGTLTTTSFSDEPTGVA
YDPSTRRLFVSDDNKGRIWIVKPGDDGVYNTEDDVLTNFRTSSFGIVDPEDVVFDSWRDH
LVVIDGTGEEVWDISPGANGVFDGASGDDQASHFDTEAMGIHDPEGIAFDTNNGHLYLLS
SKCDRIAETTISGTLIRYIDISRLKSSYAASMCAGLTYAPSSSTSGKMNLYMVTRGVDNG
ADPYENDGRIYEISFPPLEPSDNLAPVVNAGADQTITFPGSAALAGTASDDGLPSPPATL
TYSWSKVSGPGTVTFGSASSLATTASFSAAGTYTLRLTVSDSALSSSDDIVVTVNDSGGT
EPQSFSVRVSAGSDDAEEFTASNGWIYLTGNDLELIHDSEDQIVGMRFNSIPVPAGATIL
DARVQFTVKDATTGVCSLVIRGEAADHATTFTTTRYNISSRLLTSAAVNWTPAAWTAVGA
AGPDQQTPNLSSILQEIVSRPGWQSGNSLALIVTGSGTRTASAYERSASQAPQLLVTYST
SSQPTNQMPVANAQSVSTAENMAKAITLTGSDPDGDSLIYSVVTAPAHGTLSGTAPNLTY
TPSFNYSGSDSFTFKVNDGTADSAPATVSITVTEAANNPPVANAQSVSTAENTAKAITLT
ASDPDGDSLTYVVVTAPSHGTLSGTAPDLTYTPASGYSGLDSFTFKVNDGTVDSASATVS
ITVTAVNDAPVANAQSVSTAEDTAKAITLTGSDPDGDSLTYSVVTSPSHGTLSGTAPDLI
YTPASNYSGSDSFTFKVNDGTVDSSPATVSITITAVNDAPVANPQSVTTPANMSTTITLT
GSDPDGDKLTYNVVSGPTQGTLSGSAPNLIYTPASPYYVGPDSFTFTVNDGMIGSTPATV
SITITAPVNSAPIVNAGIDQTIILSASAYLNGSATDDGLPNPPAMLTYTWSKVTGPGTVT
FENTSSPVTTATFSKGGGYTLRLTVSDGDLSSSDDIAVNVRRK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
gtgccgctggagggatcctgccgaagggatgctgaaatgaaagcaacaagatatttcctc
gccgtgctggccgccctgttcgctttttccggatttttcgcgccggcagttctggccgcc
gagaccgtaactgccgtgctggagcggattaccctgacctcggagttttcaccgcccagt
cccgatcccgcggggatcgtctatctttcggactacaacaccctgctgatcagtgactgt
gaagtcgacgagatgcctccctacttcacggggaaaaatctctttgaagcgactctggga
gggagcctgctgggcacgctgacgacgacctccttttcagacgaacccaccggggtcgcc
tacgatccttccaccagacgcctgttcgtcagcgacgacaacaagggacggatctggatc
gtgaagccgggagacgacggggtttacaatacggaagacgatgttctcaccaatttccgg
acttcctcgttcgggattgtggaccccgaagacgtcgtatttgacagttggcgggatcat
ctggttgtcatagacggcacgggggaagaggtctgggatatctctccgggtgccaacggc
gtttttgacggcgcttcgggtgatgatcaggcaagccacttcgatacggaggctatggga
attcatgatccggaggggatcgccttcgatacgaacaacggccatctgtatctgctgagc
agcaaatgcgacaggatcgcggagaccaccatcagtgggaccttaatccgctacattgat
atttcccgtctcaagtcctcatacgctgccagcatgtgcgccggtttgacctatgcgccc
tccagcagcacttccggcaaaatgaacctctacatggtcacccgcggcgtggacaacgga
gcagatccttacgagaacgacggccggatttacgagatatccttcccgccactggagccc
tcggacaatctggctccggtggtgaatgcgggagcagatcagacgatcacgtttcccggc
agtgcagcccttgccggcacggcttcggacgacggcctgcccagtccgcccgcgacgctt
acctattcctggagcaaagtcagcgggccggggacggtgaccttcggcagcgcctcttcg
cttgcgacgacggcgagcttctcggcagcggggacttacaccctgcgcctgacggtctcc
gacagcgctctgtcgtcgagcgacgacatagtcgtgacggtgaacgacagtggggggaca
gaaccccagagcttctccgtgcgcgtttcggctggcagcgacgatgcggaagagtttacc
gcctcgaacggctggatatatctcaccggcaatgatctcgaactgattcatgacagtgaa
gatcagattgtgggcatgcgtttcaacagcatccccgttccggcaggggcaacgattctc
gatgcccgcgttcagttcacggtcaaggacgccacaaccggggtctgcagcctggtgatt
cgaggggaggctgcagaccatgccacgaccttcaccacaacccgctacaacatcagcagc
cggctgctcacttccgccgcggtgaactggactcccgcggcctggaccgcggtgggcgca
gcgggtccggaccagcagacccccaatctgagctctatcctgcaggagatcgtcagccgt
cccggctggcagtcgggcaacagcctggcgctgatcgtcacaggctcaggcacgcgaacc
gcctccgcttatgagcgttcggcgagtcaagcgccgcagctcctggtcacatattcgacc
tcatcccagcccacaaatcagatgcctgttgccaacgcacagtcggtgtcgacagccgag
aatatggcgaaagcgattaccctgacgggcagcgacccggatggggattcactgatctac
agtgtggtgacagccccggcacacggcacactgagcggaacggcgccaaatctgacgtac
acgccgtctttcaactacagtggttcggacagcttcaccttcaaggtgaatgacggcacg
gcggattcggccccggcgacggtttcgatcacagtgacggaggcggcgaacaatccgcct
gttgccaatgcacagtcggtgtcgacagccgagaatacggcgaaagcgatcaccctgacg
gctagcgacccggatggggattcactgacctacgtcgtggtgacagccccgtcacacggt
acgctgagcggaacagcgcctgatctgacttacacgccggcttccggctacagtggtttg
gacagcttcaccttcaaggtgaatgacggcacggtggactcagcctcggcgacggtttcg
atcacggttacggcggtgaacgacgcaccggtggctaacgcgcagtcggtgtcgacggct
gaggatacggcgaaagcgattaccctgacgggcagcgacccggatggagattctctgacc
tacagtgtggtgacatccccgtcacacggtacgctgagcggaacagcgcctgatctgatc
tacacgccggcttccaactacagtggttcggatagtttcaccttcaaggtgaatgacggc
acggtggactcatccccggcgacggtttcgatcacgattacggcggtgaacgacgcaccg
gtggctaacccccaatctgtaacgactcccgcaaatatgtcgacaacgatcactctgacg
ggcagcgatccggatggcgataagctgacctacaatgtggtaagcgggccgacacaaggc
acgctgagcgggtcagcccccaacctgatctatacgccggcatcgccatactatgttgga
ccggacagttttacattcactgtcaatgacggcatgattggatcgaccccggccacggtt
tcgatcacgatcactgcaccggtgaattcggcaccgatcgtcaatgcgggcattgatcaa
accatcatactttccgccagtgcctaccttaacgggtcagccacggacgacggactgccc
aacccacccgcgatgctcacttacacctggagcaaggtcacgggaccgggcacagtaact
ttcgaaaacacctcgtcgcctgtcacaacagcaacgttttccaaggggggaggctacacg
ctgcggttgaccgtttcggatggtgacctgtcatccagtgatgatatcgcggtgaatgtc
agaaggaaataa
DBGET
integrated database retrieval system
