Staphylococcus aureus subsp. aureus CN1 (CA-MRSA): SAKOR_02046
Help
Entry
SAKOR_02046 CDS
T02826
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
saun
Staphylococcus aureus subsp. aureus CN1 (CA-MRSA)
Pathway
saun03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
saun00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAKOR_02046
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
saun03019
]
SAKOR_02046
03009 Ribosome biogenesis [BR:
saun03009
]
SAKOR_02046
Enzymes [BR:
saun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SAKOR_02046
Messenger RNA biogenesis [BR:
saun03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SAKOR_02046
Ribosome biogenesis [BR:
saun03009
]
Prokaryotic type
rRNA helicases
SAKOR_02046
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
DUF5663
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGU62186
LinkDB
All DBs
Position
complement(2088997..2090550)
Genome browser
AA seq
517 aa
AA seq
DB search
MRNKQVKRRIILQNFKELGISDNTVQSLESMGFKEPTPIQKDSIPYALQGIDILGQAQTG
TGKTGAFGIPLIEKVVGKQGVQSLILAPTRELAMQVAEQLREFSRGQGVQVVTVFGGMPI
ERQIKALKKGPQIVVGTPGRVIDHLNRRTLKTDGIHTLILDEADEMMNMGFIDDMRFIMD
KIPAVQRQTMLFSATMPKAIQALVQQFMKSPKIIKTMNNEMSDPQIEEFYTIVKELEKFD
TFTNFLDVHQPELAIVFGRTKRRVDELTSALISKGYKAEGLHGDITQAKRLEVLKKFKND
QINILVATDVAARGLDISGVSHVYNFDIPQDTESYTHRIGRTGRAGKEGIAVTFVNPIEM
DYIRQIEDANGRKMSALRPPHRKEVLQAREDDIKEKVENWMSKKSESRLKRISTELLNEY
NDVDLVAALLQELVEANDEVEVQLTFEKPLSRKGRNGKPSGSRNRNSKRGNPKFDSKSKR
SKGYSSKKKSTKKFDRKEKSSGGSRPMKGRTFADHQK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
ttgagaaataaacaggtaaaaaggagaattattttgcaaaattttaaagaactagggatt
tcggataatacggttcagtcacttgaatcaatgggatttaaagagccgacacctatccaa
aaagacagtatcccttatgcgttacaaggaattgatatccttgggcaagctcaaaccggt
acaggtaaaacaggagcattcggtattcctttaattgagaaagtagtagggaaacaaggg
gttcaatcgttgattttagcacctacaagagaattggcaatgcaggtagctgaacaatta
agagaatttagccgtggacaaggtgtccaagttgttactgtattcggtggtatgcctatc
gaacgccaaattaaagccttgaaaaaaggcccacaaatcgtagtcggaacacctgggcgt
gttatcgaccatttaaatcgtcgcacattaaaaacggacggaattcatactttgatttta
gatgaagctgatgaaatgatgaatatgggattcatcgatgatatgagatttattatggat
aaaattccagcagtacaacgtcaaacaatgttgttctcagctacaatgcctaaagcaatc
caagctttagtacaacaatttatgaaatcaccaaaaatcattaagacaatgaataatgaa
atgtctgatccacaaatcgaagaattctatacaattgttaaagaattagagaaatttgat
acatttacaaatttcctagatgttcatcaacctgaattagcaatcgtattcggacgtaca
aaacgtcgtgttgatgaattaacaagtgctttgatttctaaaggatataaagctgaaggt
ttacatggtgatattacacaagcgaaacgtttagaagtattaaagaaatttaaaaatgac
caaattaatattttagtcgctactgatgtagcagcaagaggactagatatttctggtgtg
agtcatgtttataactttgatatacctcaagatactgaaagctatacacaccgtattggt
cgtacgggtcgtgctggtaaagaaggtatcgctgtaacgtttgttaatccaatcgaaatg
gattatatcagacaaattgaagatgcaaacggtagaaaaatgagtgcacttcgtccacca
catcgtaaagaagtacttcaagcacgtgaagatgacatcaaagaaaaagttgaaaactgg
atgtctaaaaagtcagaatcacgcttgaaacgcatttctacagagttgttaaatgaatat
aacgatgttgatttagttgctgcacttttacaagagttagtagaagcaaacgatgaagtt
gaagttcaattaacttttgaaaaaccattatctcgcaaaggccgtaacggtaaaccaagt
ggttctcgtaacagaaatagtaagcgtggtaatcctaaatttgacagtaagagtaaacgt
tcaaaaggatactcaagtaagaagaaaagtacaaaaaaattcgaccgtaaagagaagagc
agcggtggaagcagacctatgaaaggtcgcacatttgctgaccatcaaaaataa
DBGET
integrated database retrieval system
