Shewanella avicenniae: JYB87_00035
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Entry
JYB87_00035 CDS
T07845
Name
(GenBank) DNA-3-methyladenine glycosylase I
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
savi
Shewanella avicenniae
Pathway
savi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JYB87_00035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
savi03400
]
JYB87_00035
Enzymes [BR:
savi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
JYB87_00035
DNA repair and recombination proteins [BR:
savi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JYB87_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-ProteinID:
QSX33698
LinkDB
All DBs
Position
9273..9860
Genome browser
AA seq
195 aa
AA seq
DB search
MDSLTRCGWVSTDTVYQQYHDEVWGRPVYEPLELFAKLCLDGQQAGLSWITILKRQQNYY
DAFANFIPSEIAKFDDARVDALMLNSGIIRNRAKIRSIVGNAKAYLAMEQQGENFSEFLW
SFVGGEPQVNHFKQLSEVPAQTSASLAMSKALKKKGFNFCGPTICYAFMQAVGMVNDHLT
DCFCYNSCIDVSRET
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggattcactgactcgttgtggttgggtttcaaccgatactgtgtatcaacagtatcat
gatgaggtgtggggaagaccggtttatgaaccactggagctgtttgccaaattgtgtctt
gatggccagcaagccgggcttagttggatcaccattcttaaacgacagcaaaattactat
gatgcttttgctaacttcatcccgagtgagattgccaaatttgatgatgctcgtgtagat
gcgttgatgctgaacagtggcattattcgaaatcgcgctaaaattcgatccattgttggc
aacgccaaagcctatttagccatggagcaacagggtgagaattttagtgaattcttatgg
agttttgttggtggagagccacaggttaatcactttaagcaattaagtgaggtgccagcg
caaacgtctgcatcattggctatgtcaaaggcgttaaagaaaaaaggctttaatttttgt
gggccgactatctgttatgcgtttatgcaagctgttggtatggtgaatgatcatttaact
gattgtttttgttataattcatgtattgatgtttcacgtgaaacatga
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