Shewanella avicenniae: JYB87_00615
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Entry
JYB87_00615 CDS
T07845
Name
(GenBank) IS3 family transposase
KO
K07497
putative transposase
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
JYB87_00615
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Gene cluster
GFIT
Motif
Pfam:
rve
rve_2
rve_3
HTH_Tnp_1
HTH_28
HTH_23
HTH_21
DDE_Tnp_IS240
HTH_Tnp_1_2
HTH_29
ATPaseInh_sub_z
Motif
Other DBs
NCBI-ProteinID:
QSX33792
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Position
complement(join(138852..139759,139759..140002))
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AA seq
383 aa
AA seq
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MSTKKPRKIHTQEFKAEALKLAQKIGVAAAARELNLYESQLYNWRSSTEKKSNTTSREAE
LAAEVARLKRQLAEQAEDLAIPKKGGHLLREEPKVARFEFILEHQHRFSLKRMVEVLKVS
RSGYYTWRQNGMTLSPRAIKRAARDVLIKASFDDSKKRNGARRIQQDLADNDCKADIKTI
MDSMSRQCLVPKAAKKFKVTTDSNHKHPVAPNLLEQNFTANAPNLKWAGDITYLYTNEGW
LYLAVIIDLYSRTVVGWSMASRMTSELVCDALRMALFRRSFPTGVIVHSDRGSQYCANDY
RALLQKHQLVQSMSRKGNCWDNACVESFFHTLKVEALQDEPLMTRDQMRQAVFEYIEVDY
NRTRRHSALGYLSPENFELKNSA
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaaagaaaccccgcaagatccatacgcaagaatttaaagccgaagctcttaag
ctcgctcaaaagattggtgtagccgccgcagcgcgtgagcttaatctttacgaatcccaa
ctctacaattggcgttccagtactgagaagaaatccaatactacgtctagggaagcagaa
cttgctgctgaggtcgcaaggcttaaacgccaacttgctgaacaagcggaagatttggcc
atccctaaaaaaggcggccacctacttcgcgaagaaccaaaagtagccagatttgagttc
atcctcgagcatcagcaccgtttttctctcaagcgaatggtggaggtactcaaggtatcg
cgtagtgggtattacacctggcggcagaacggcatgacgctgagcccaagagcgattaag
cgtgcggcccgtgatgtgctgattaaagcgtcttttgacgattccaagaagcgcaatggc
gcacggcgtattcagcaagatttagcggataatgactgtaaggcggatatcaaaaccatt
atggacagcatgtcacggcagtgtttagtgccaaaggcagcgaagaaatttaaggtaacg
accgacagcaaccacaagcatccagtcgcacctaatttgctagagcagaactttactgca
aatgcgccgaacctgaagtgggctggcgacatcacgtatctgtacaccaacgaaggatgg
ctatatctggctgtaatcattgacctttactctcgcacagtggtgggttggtcgatggca
agcagaatgacatcggagcttgtttgtgatgcattgaggatggctttattccgccgaagc
tttcctaccggcgtgattgtccatagcgaccgaggcagccaatactgcgcaaatgattac
cgtgctttgcttcagaaacatcagttagtacaaagcatgagccgtaaaggaaattgttgg
gataatgcctgcgtggaaagcttcttccacacattaaaggttgaagcgctgcaagatgag
cctctcatgacacgagatcaaatgagacaagctgtatttgagtacattgaggttgattac
aatcggaccagacggcatagtgctcttggttatttgagcccagaaaactttgaattaaaa
aatagtgcttag
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