Shewanella avicenniae: JYB87_01620
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Entry
JYB87_01620 CDS
T07845
Name
(GenBank) outer membrane protein transport protein
KO
K06076
long-chain fatty acid transport protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_01620
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_01620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Toluene_X
DUF2490
OMP_b-brl
BBP2
Porin_4
Motif
Other DBs
NCBI-ProteinID:
QSX33982
LinkDB
All DBs
Position
365163..366515
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AA seq
450 aa
AA seq
DB search
MTQKFKLTLLSAALLGMGVQLPVQAAGFQLAESSATGLGRAFAGEAASAENPSVQARNPA
MLSYLKGRQVSVGAVYVMPEVDTPGTLSINSPLLPQTIVVDGSVDDVANNAAVPNFYYSS
QLNDRWTWGLALNSNYGLETELPASHASAIFGNKTSVTTVELNTNIAYKIDRHVTVGGGM
RFVYGEGEIGATTPAWLDNVKAIPTVPAAIAAQLPAAGTELKHLEGDDFGIGWRAGASWQ
IDAKNRIGLAYSSSVKLDLDGKARGVMYTGGSATVRGYIPLELPAFAELASYHQLTDDFA
LQASINWTDWSAFDELTVYFPHEEKPLSGVDADLVKEEHFKDNWRYSVGGTYQASKALTL
RAGVALDKTAVADENRTITIPDSDRLWFSLGAGYALSDAMTLDLGVTYIKAHGDSPIDET
QSLLNLAQVTYQGESVGHVWLAGLQFTYKM
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgactcagaaattcaaactgacactgttatctgcagcgctattggggatgggcgtgcag
ttaccggtacaagctgctggtttccaattggctgaatcatcagccaccggtcttggtcgt
gcctttgcaggcgaagctgcgagtgctgaaaatccatcagtgcaagcgcgtaacccggcc
atgttgagctacttgaagggacgccaagtctccgtcggcgcggtgtatgtgatgccagag
gtggacactcccggaacactttcgatcaattcaccgctgctgccacagacgatcgtagtc
gatggcagcgttgatgatgtggccaacaatgccgcagtacctaatttctattactccagc
caacttaacgaccgctggacctggggtttggcgcttaactcaaactacggtttagagacc
gaactgcccgccagtcatgcatctgctatttttggcaacaagacatcggtaacgaccgtt
gagctcaataccaacatcgcctacaaaattgatcgccacgtcacagtgggcggcggcatg
cgttttgtttacggcgaaggtgagattggcgcaaccacaccggcatggctggacaacgtt
aaagctattccaacggtacccgccgccattgctgcgcaactgccggccgcaggcacagag
ctgaagcacctcgaaggggatgattttggtattggctggcgtgcaggcgcgagctggcaa
atcgatgcgaaaaaccgtattggtttggcctatagcagttcagtgaaactggacttagac
ggtaaggcgcgtggcgtgatgtacaccggtggttcagcaaccgtacgaggttatattccg
ttggagttgccagcctttgctgaattggcctcttaccatcaactgaccgatgattttgcg
ctgcaagccagcatcaactggactgattggagcgcatttgacgaactgacggtgtacttc
ccacatgaagagaaacccttgtcaggtgttgatgctgacttagtcaaagaagaacacttc
aaggataactggcgttattccgtcggtggcacttatcaagccagcaaagcgctgacgcta
cgtgctggggttgcgttggataaaaccgccgtggctgatgaaaaccgcaccatcaccatt
cctgacagtgaccgcttgtggttcagcttgggtgctggttacgcgcttagcgatgcgatg
accttagatttaggcgttacctacatcaaggcgcatggcgattcgccaatcgatgaaacc
caatcattactgaatctggcgcaagtgacttaccaaggcgaatcagttggccatgtgtgg
ttagcaggattgcagttcacttacaagatgtaa
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