Shewanella avicenniae: JYB87_04005
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Entry
JYB87_04005 CDS
T07845
Name
(GenBank) TonB-dependent receptor
KO
K16087
hemoglobin/transferrin/lactoferrin receptor protein
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_04005
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_04005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
Motif
Other DBs
NCBI-ProteinID:
QSX34424
LinkDB
All DBs
Position
complement(926091..928076)
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AA seq
661 aa
AA seq
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MKKRYLACLIASTLTHTAWADDDNLERLQVWGTKVTSSSVYVDESAIASKQADHLSDLLR
EIPGVDVGGTHSLNQRINVRGLDDTDLEILIDGASQNNSMFHHMGNLNINPDILESVDIQ
VGSNSVVHSGLGGAMEFRTKSARDLLDGQNAFGGRVLLGYNSNNNEYLSFTGYGQLTDSL
DFIAYGTTQNRNNFKDGEGIKVLGSDGTISNLMAKLGWDINEQQRLALKYDSYRNHGDYT
ARPDMGVRTNSAIGGGDVPLYDTHYDRDTISAHYELDFGAALNLRADLYQNTSDLWRDYE
GDQTSGTSKNSGLTLIANSALTSVSLTHQFTYGVKWLKIDNDSETVATDGITLGHEQADD
LGVFVEDAIDFGNGLIVTPGVRFNHYSKSSATIPEQQSWDNWQTALAAQYALTEDITLHA
STTELFKGPQPGEIFSNEQAGKILNPELAPETGRNSEAGIRYNGANVLGADEIRLGFTAF
QTQIDDYIEAVDYPLDDCTGRNCMEWDQNIGKVKIHGYEASAFYALNEFSTLVTYASSDS
KVHDDGATGGEPLDREVGDSATVTFKYFVTSQDLELRWQWQKTFAEGEKAGYQLHNITAV
WEPAVFNYNLNVTLGVENLFDTLYVSHASRTGVTNHPVFGLLQLDDYEPGRNIKLSVAYK
F
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaagcgctacttagcatgtcttattgcatccactcttactcacacagcttgggca
gatgacgacaacttagaacgtctacaagtgtggggaaccaaggtcactagctcatcggtt
tatgtcgatgagtcagcaattgcctcaaagcaggccgatcatttaagtgatttgttaaga
gaaattcccggtgttgatgtgggcggtacccactcactcaaccaacggattaacgtgcgc
ggtctcgacgacaccgatctagagattttgatcgacggtgcttcacaaaataacagcatg
tttcaccacatgggcaacctcaacatcaaccctgatattttggaatcggttgatattcaa
gtgggttcaaattccgtcgtgcactctgggttgggcggtgcaatggagttccgcactaaa
tcagcgcgcgatctgcttgatggtcaaaatgcctttggcggccgcgttctgctgggttac
aacagcaataacaacgaatacttgtcgtttaccggttatggtcagttgaccgatagcctc
gactttatcgcttacggcaccacgcaaaaccgtaataactttaaagacggtgaaggcatt
aaagtgctgggtagcgatggcaccatcagcaacctgatggcgaaattgggttgggatatc
aacgaacaacaacgcctcgccctcaaatacgatagctaccgtaaccatggtgattacact
gcccgtcctgatatgggcgtgcgcaccaacagcgctattggcggtggcgatgtaccgctg
tacgacactcactatgaccgtgacaccatcagcgcacactatgaattagatttcggtgca
gcgcttaacctgcgtgccgatctctatcaaaacacatccgatttgtggcgtgactatgaa
ggcgaccaaacatccggtacttcaaagaactccggtttaaccttaatcgccaatagcgcc
ctaacaagtgtgagcttgactcaccaattcacctacggggtgaagtggttaaagattgat
aatgacagtgaaactgtcgccacagatggcattactctgggtcatgagcaagcggatgat
ctgggtgtatttgttgaagatgctatcgacttcggtaacggcctcatcgtaacgccgggg
gtacgtttcaaccactacagcaaatcttctgcaaccattcctgaacagcaaagctgggat
aactggcaaacggcattggcggcgcaatatgcgctgacggaagatattacgctacatgcc
agcaccacagaactgtttaaagggccgcaaccgggggagattttcagtaacgaacaagcg
ggtaaaatcctcaaccctgaactagcgccagaaaccggacgcaacagtgaagcaggtatt
cgctacaatggcgctaacgtgctgggtgctgatgaaatacgtcttggcttcaccgcgttt
caaactcaaatcgatgattacattgaagcagtagactacccactcgatgactgtactggc
cgtaactgtatggagtgggatcaaaacatcggtaaagtgaagatccacggttatgaagcc
agtgctttctatgcactgaacgaattctctaccttggtaacgtacgctagctctgattca
aaagtccatgacgatggtgcaacgggtggcgaaccgttggatcgtgaagtgggcgatagt
gcaaccgtgaccttcaagtactttgttacttcacaagatttagagctgcgctggcagtgg
caaaaaaccttcgctgaaggtgaaaaagccggttatcagttacataacatcaccgccgtg
tgggaacctgcagtatttaactacaacctcaacgttaccctaggcgtcgaaaacctgttt
gataccctgtatgtatcccacgcatcacgcacaggggttaccaatcatccggtgtttggc
ctgctgcaattagacgactatgagccagggcgcaatatcaaactgtcagtcgcgtacaag
ttctaa
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