Shewanella avicenniae: JYB87_04175
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Entry
JYB87_04175 CDS
T07845
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
savi
Shewanella avicenniae
Pathway
savi00260
Glycine, serine and threonine metabolism
savi00630
Glyoxylate and dicarboxylate metabolism
savi00785
Lipoic acid metabolism
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01200
Carbon metabolism
Module
savi_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
JYB87_04175 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JYB87_04175 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JYB87_04175 (gcvP)
Enzymes [BR:
savi01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
JYB87_04175 (gcvP)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
QSX34454
LinkDB
All DBs
Position
965203..968091
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AA seq
962 aa
AA seq
DB search
MTKQTLAQLEQHDLFIRRHIGADADQQQQMLNYVGADSLEDLTAQIVPEAIRLGRELALD
DSCTEAAGTECLREIAAKNKVFKSYIGMGYYGTEVPKVILRNVLENPGWYTAYTPYQPEI
AQGRLEAILNYQQMSMDLTGLDLASASLLDEATAAAEAMALAKRVSKAKNANIFFVADDV
FPQTIDVVKTRAECFGFEVVVGPADTAADYELFGALFQYTNKLGAIGDYAALFAKLQEKK
AIITVAADIMSLVLLKSPGAIGADVVFGSAQRFGVPMGFGGPHAAFFVTKDAHKRSMPGR
IIGVSKDTRGNSALRMAMQTREQHIRREKANSNICTAQILLANMASFYAVYHGPQGLKTI
AERIHRLTDILAAGLSAKGVSLTNSTWFDTLTFTVADVDAVVARAAAAEVNLRVDAEGTL
GVSLAETTTRADIAELFDIILGAGHGLDVAALDSDIVANGIASIPEHLVREDAILTHPTF
NQYHSETEMMRYIKRLEDKDLALNHSMISLGSCTMKLNAAVEMIPVSWPEFANMHPFCPQ
DQAQGYTQLVNELSDWLVEITGYDAVCMQPNSGAQGEYAGLLAIKKYYEANGQAHRDVCL
IPHSAHGTNPASAQLAGMKVVVVECDKQGNVDMADLRARAAEVADNLACIMITYPSTHGV
YEESVREICDIVHQHGGQVYLDGANMNAQVGITAPGFIGADVSHLNLHKTFAIPHGGGGP
GMGPIGVKAHLAPFVAGHSVVKLGKASDNNGAVSAAQYGSAGILPISWMYIKLLGAKGLR
LSTQTAMLNANYLAKKLSEHYPVLYRGRNDRVAHECIIDLRPLKEASGVTEMDIAKRLND
YGFHAPTMSFPVAGTLMIEPTESESKVELDRFIEAMVSIRGEIAKVEAGEWPADNNPLHN
APHTMADIMDPTFDERPYSRELAVFPSAAVRANKFWPTVNRIDDVFGDRNLHCSCVPVSE
YK
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagcaaactctcgctcagctcgagcaacacgatctgtttattcgccgccatatc
ggtgctgatgctgaccaacagcaacagatgctgaattatgttggcgcggattctctggaa
gatctcaccgcacaaatcgtgccggaagctattcgtcttggccgtgaactggcactggat
gactcatgcaccgaagccgcaggtactgaatgcctgcgtgagattgccgccaaaaataag
gtgtttaaaagctatatcggtatgggctactacggtactgaagtaccaaaagttatcctg
cgcaacgtgctggaaaacccaggttggtacaccgcttacaccccttatcagccagagatt
gctcaaggtcgtttagaagcgattctgaactaccaacagatgtcgatggatttgactggt
ctggatctcgcctcagcatcactgctggatgaagccacagccgctgctgaagcaatggca
ctggctaagcgtgtatctaaggctaaaaatgccaacatcttctttgtcgctgatgatgta
ttcccacaaaccatcgacgtggtcaaaacccgcgccgaatgttttggttttgaagtcgta
gttggcccggctgacaccgccgctgattacgagctgtttggcgccctgttccaatacacc
aacaagctgggtgcgattggcgattacgccgcgctgtttgccaaactgcaagagaagaaa
gccattatcactgtagccgcagacatcatgtcgctggtgctgttgaaatcaccgggcgca
attggtgctgacgtagtgtttggttcggcgcaacgctttggcgtgccaatgggctttggt
ggtccacacgcagcattctttgtcactaaagatgcccacaagcgttcaatgccaggccgt
attatcggtgtatcaaaagatactcgcggtaacagcgcgctgcgtatggcaatgcaaacc
cgtgagcaacatatccgccgcgaaaaagctaactcaaacatctgtactgcacagatcctg
ctggccaacatggcatcgttctacgcggtttatcatggcccacaaggtctgaaaaccatc
gctgagcgcattcaccgtttgaccgacattctggcggctggcttaagcgccaaaggcgtg
agcctcactaacagcacttggttcgacaccctgacgttcaccgttgcggatgttgatgcg
gtagttgcccgtgcggcagcggctgaagtgaacctgcgtgttgatgctgaaggcacactg
ggtgtcagcttggctgaaaccaccactcgcgctgatatcgctgaactgttcgatatcatc
ctcggtgcaggtcatggtttggatgtcgccgcgctggatagcgacattgttgctaatggc
atcgcgtctatccctgagcacttagtgcgtgaagatgcgattctgactcacccaaccttc
aatcagtatcacagcgaaactgagatgatgcgttatatcaaacgtcttgaagacaaagac
ttagcgctgaatcactcaatgatttctctgggttcatgcaccatgaagctgaacgcagcg
gtggaaatgatcccagtcagctggcctgaatttgccaacatgcacccattctgcccacaa
gatcaggcacaaggttacacccaactggtgaacgaactgtctgattggttggtggaaatc
accggttacgatgccgtgtgtatgcagccgaactcaggcgcacaaggcgaatacgctggt
ttgttggcgattaagaaatactacgaagccaacggccaagcacaccgcgacgtgtgtttg
atcccacactcagctcacggcactaacccagcatcagcccagctggcgggtatgaaagtg
gtcgtggttgaatgtgacaagcaaggtaacgttgatatggccgatctgcgcgcacgcgct
gcagaagtggctgacaacttagcttgtatcatgatcacttacccatcgactcacggcgtg
tatgaagaatctgtgcgcgaaatctgcgatatcgtgcatcaacatggcggtcaggtgtac
ctcgatggcgccaacatgaacgcgcaggtgggcattactgcaccgggctttatcggcgct
gacgtatcgcaccttaacctgcataagacctttgctatccctcatgggggcggcggtcca
ggtatgggtcctatcggtgttaaggcacacttggcaccgttcgtcgctggtcactcagtg
gtaaaactgggcaaagcaagcgacaacaacggcgcagtatctgcggcgcaatacggtagt
gcgggcatcctgccaatcagctggatgtacatcaagctgctgggcgcgaaaggcttacgt
ctgtcgacccaaaccgccatgctgaacgctaactacttggccaaaaagctgtctgagcac
tatccagtgttgtaccgtggccgtaacgaccgcgtggcgcacgaatgtattatcgacctg
cgtcctctaaaagaagcatcaggcgtgactgaaatggatatcgctaagcgtttgaacgac
tacggtttccatgcgccaaccatgagcttcccagtagcgggtacgctgatgattgagcca
accgagtctgaatcaaaagtggaattggatcgctttattgaagcgatggtgtctatccgt
ggcgaaatcgccaaagtggaagccggcgagtggccagcggataacaacccgctgcacaat
gcgccgcacactatggcggatatcatggacccaacgtttgatgagcgtccttacagccgt
gaactggcggtgttcccaagcgcggcagtacgtgccaataagttttggccgacggttaat
cgtattgatgacgttttcggggacaggaaccttcactgtagttgtgtacctgtttctgag
tacaaataa
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