Shewanella avicenniae: JYB87_10460
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Entry
JYB87_10460 CDS
T07845
Name
(GenBank) carbohydrate porin
KO
K07267
porin
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_10460
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_10460
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
DUF3670
HbpS-like
Motif
Other DBs
NCBI-ProteinID:
QSX32204
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All DBs
Position
2368113..2369180
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AA seq
355 aa
AA seq
DB search
MTPLLRTFYAASLSVMTSVCFADDTENGFVPFAAIVIDNSQVVSGGLERGFTSRFLVDGG
FEFNHGQHFIFADLQLQRGDDGSAMTGDAQAYSNIDEADFTKLYQLNYYVSFSRGFLRVG
RHDANEEFANTLASDGFINASMGFSPTIAALPTYPYPALTLHGGINISEQFELVGGVYAS
GSSSRFDEQFYIAELRTAITSSLLLKTGVWLDTNSVVDDTEQRVANSSHGVYSTLDTDVG
KLSWLGGTQADHFIQLGYTHHHYSEIDFHAGMGIRLTELFGREDQNAGVGITAVRMRQQT
GEFIGWESTLELYWQVMIHDQVMLQPDVQFIQHPSGVTDIDDAWVITLRIEVSAF
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgactccgttgctacgcaccttttatgcagcttcattgtcagtaatgacctctgtttgt
tttgccgatgacacagaaaacggctttgttccgtttgcggcgatcgttatcgataactcg
caagtcgttagcggtgggctggaacgcggttttacatcacgctttttggttgatggcggc
tttgagttcaatcacggccaacattttatttttgccgatctacaacttcagcgcggtgat
gatgggtcggcaatgactggcgatgctcaagcctattccaatattgatgaagccgatttt
accaagctatatcaactcaattattacgtcagtttttcgcgggggttcttgcgcgtaggt
cgacatgatgccaacgaagagtttgctaacacccttgcaagtgacggctttattaatgct
tcaatggggtttagcccaaccattgcagcccttcccacctacccttatccagcactgacg
ctgcatggcggcattaacatttcagaacaatttgagttggtgggtggtgtgtatgcatcc
ggctcttccagccgatttgacgagcagttttatattgcagaattacgtactgcaatcaca
tcaagtttactgcttaaaaccggtgtctggttggacacgaattcagtggtggatgatacc
gaacagcgcgttgctaatagcagtcacggtgtttatagcacactcgataccgacgttggc
aagctgagttggttgggaggaacgcaagcagaccacttcattcaactggggtacacccac
caccactacagcgagattgatttccatgcaggcatgggaattaggctgaccgaactcttc
ggcagagaagatcaaaatgccggagttggcattacggcggtgcggatgcggcagcaaact
ggcgagtttatcggatgggagtccacactggaactgtactggcaagtgatgatccatgat
caggttatgttgcagccagacgtacaatttattcaacacccgtcaggcgtaaccgatatt
gatgatgcgtgggtaataacattacgcattgaagtaagtgctttttaa
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