Shewanella avicenniae: JYB87_11090
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Entry
JYB87_11090 CDS
T07845
Name
(GenBank) VWA domain-containing protein
KO
K07114
Ca-activated chloride channel homolog
Organism
savi
Shewanella avicenniae
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
savi02000
]
JYB87_11090
Transporters [BR:
savi02000
]
Other transporters
Pores ion channels [TC:
1
]
JYB87_11090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA_2
TPR_2
TPR_1
TPR_11
TPR_7
TPR_8
TPR_12
TPR_16
TPR_14
TPR_6
Collagen
ANAPC3
TPR_9
TPR_17
Motif
Other DBs
NCBI-ProteinID:
QSX32320
LinkDB
All DBs
Position
2512972..2515062
Genome browser
AA seq
696 aa
AA seq
DB search
MSLHFIRPEWFLALIPLGLWLLWFAKRNPAQSNWNRYIAPHLAATLINTGDREKKSQLPW
LALSLAIAVVALSGPALYQKPVPVFASSEGRVLLMDMSLSMYATDITPNRLTQSRFRATD
LLNGLKEGETGLIAYAGDAFVISPLTRDHNTLLNLLPTLSPEIMPVLGSNLPNAIEKAKD
LLTQGGHIKGDIVLITDGVNVEQLNAVKQALADSHYRLDILAIGSAQGAPIKLSSGQLMR
DNKQDLVVPTTDFNQLYELALSSGGKLFPYANDGSDLTKLRDWLNAEDNVTGAAATQLAG
DTWYDLGPYIALLLLVPVLLAFRVGLPLLALVLLPMSLAITPQPAVASTWDNLWQTADQQ
GMQAFKQGDFNNAAAQFETPAWQGAAKYKAGDYQGALKAFEQDNSAAGYYNQGNALMQLG
NYEEAIKRYNQSLLQDPNMPEAKANKALAEQLLKQQQNQQNQQDQKDQKDQKDQQDQQNQ
QDKSKQQQDNQDTNKDGDQGSDKSQQGDQQQDQNGQQGQQGQQGQQGQQGQQGQQGQQGQ
DKSAAGHNDSGEQQDDPQAQADNAQANDANAEQKQSESGQAASGDEANKAQAPQAEMQAQ
VGNDGESANAEPAAQNAEQQAAATAQAGDGEQSDQSAPQTGTVKAREANPDELPADMSRA
LKAVIDDPSALLRNKMKLEYQKRRQRGELPKEQQKW
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgcattttattcgtcccgaatggtttcttgcgctcattccactggggttgtgg
ctgttgtggttcgccaaacgaaaccctgcgcaatccaactggaaccgttacatcgcacca
catctggccgcgaccttaattaacaccggtgacagagagaaaaagtcacagttgccttgg
ttggcgctcagtttggccattgccgtagtggcgctcagcggccccgcgctctaccaaaag
ccggtgccggtttttgccagcagcgaaggccgcgtgctgctgatggatatgtcgctgtcg
atgtacgctaccgacattaccccaaaccgcttaacccaaagtcgctttcgcgccaccgat
ctgctcaatggcttaaaagaaggtgaaacgggcttaattgcctacgcaggcgatgcgttt
gtgatcagtccgctgacgcgcgatcacaacaccctattaaatcttttgccaacgctcagc
ccggaaatcatgccggtgctcggctctaatttgcccaatgcgattgagaaagccaaagat
ctgctaacccaaggcggccatatcaaaggcgatattgtgctcatcaccgatggcgtgaat
gttgagcagctcaacgcagtaaaacaagcgttggcagacagtcattatcggcttgatatt
ctggctatcggcagtgcccaaggtgcgccgattaagctgtctagcggccagttaatgcgt
gataacaagcaagatctcgtggtgccaaccactgactttaaccaactctatgagttagcc
cttagcagcggtggcaaactgttcccatacgccaatgacggtagcgatttaaccaaactg
cgcgattggctcaatgccgaagacaatgttaccggcgcagccgccacccaactggcgggc
gacacttggtatgatttaggcccctatatcgcactgctgctgttagttcctgtgttattg
gcgtttcgggttggcctgccattattggcgctagtgctcctgccgatgagtttagcgata
acgccacagccagccgtcgccagtacgtgggataatctgtggcaaacggcagatcaacaa
gggatgcaagcctttaagcaaggcgactttaacaacgccgccgcgcaatttgaaacccca
gcgtggcaaggtgcggcgaagtataaagcaggcgattaccaaggcgcacttaaagcattc
gagcaagacaattctgccgcaggttattacaaccaaggtaatgcgctgatgcagttgggc
aattatgaggaagccatcaaacgctataaccaaagtttgttgcaagatccgaatatgccc
gaggcaaaagccaataaagccttagcggaacagttgctaaaacagcagcaaaatcagcag
aaccaacaagaccagaaagaccagaaagaccagaaagaccagcaggaccaacagaaccag
caggacaagtcgaaacagcagcaagacaatcaggacacgaacaaagacggcgaccaaggc
tctgacaagtcacaacaaggtgaccaacagcaagaccaaaatggtcagcaaggtcagcaa
ggtcagcaaggtcagcaaggtcagcaaggtcagcaaggtcagcaaggtcagcaaggtcag
gataaaagtgctgctggccacaacgatagcggcgagcaacaggatgacccgcaagctcaa
gcggataacgcgcaagcaaatgatgctaacgccgagcagaaacaatcagaaagtggtcaa
gcggcaagcggcgatgaagctaacaaggcgcaagcaccacaagccgagatgcaagcacaa
gtcggcaatgatggcgaatcagcgaacgccgaaccagcagcgcaaaacgctgaacagcaa
gccgcggcaacagcacaagccggtgacggagagcaaagcgatcaatctgcgccacaaacc
ggaacagtgaaagcacgcgaagccaacccggatgagttgcccgccgatatgagccgtgca
ctcaaagccgtgattgacgatccgtcagcactattgcgcaacaagatgaaattggaatat
caaaaacgccgccaacgtggcgagttacccaaggaacaacagaagtggtaa
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