Shewanella avicenniae: JYB87_13070
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Entry
JYB87_13070 CDS
T07845
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
savi
Shewanella avicenniae
Pathway
savi00521
Streptomycin biosynthesis
savi00523
Polyketide sugar unit biosynthesis
savi00541
O-Antigen nucleotide sugar biosynthesis
savi01100
Metabolic pathways
savi01110
Biosynthesis of secondary metabolites
savi01250
Biosynthesis of nucleotide sugars
Module
savi_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
savi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
JYB87_13070 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
JYB87_13070 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
JYB87_13070 (rfbC)
Enzymes [BR:
savi01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
JYB87_13070 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Peptidase_M1
Motif
Other DBs
NCBI-ProteinID:
QSX32676
LinkDB
All DBs
Position
complement(2949424..2949969)
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AA seq
181 aa
AA seq
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MKVIDTAIAEVKIIEPQVFGDERGFFMETWRETWFNEQVCERRFIQDNHSKSRQGILRGL
HYQTENTQGKLVRVVSGEVFDVAVDMRKSSPTFGQWVGVLLSAENKRQLWVPEGFAHGFY
VTTETAEFVYRCTDYYNPNAEHSVRWDDPDLAINWPLVNGELPSLSAKDADAKWLKDAVT
F
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattgatacagcgattgctgaagtaaaaattattgaaccgcaagtatttggc
gatgaacgtggttttttcatggaaacttggcgtgaaacttggttcaacgagcaagtttgc
gaacgtcgttttattcaagataaccattccaaatcacgccaaggtattttgcgcggcttg
cactatcaaactgaaaatactcaaggaaagttagtgcgcgtagtgagtggcgaagtgttt
gatgttgctgtggatatgcgtaaatcatcacctacctttggtcaatgggttggtgtatta
ctctccgctgaaaacaagcgtcaattgtgggtgcctgaaggctttgcccacggtttttat
gtaaccacagaaactgctgagtttgtttatcgttgtaccgattactacaacccaaatgcg
gaacactcagtacgttgggatgatcccgatcttgctatcaactggccattggtcaacggt
gagctgccatcattgtcagcgaaagatgctgacgctaaatggctgaaagatgcggttact
ttttaa
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