Natronosalvus rutilus: NGM29_06850
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Entry
NGM29_06850 CDS
T08271
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
sawl
Natronosalvus rutilus
Pathway
sawl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sawl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NGM29_06850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sawl03019
]
NGM29_06850
03016 Transfer RNA biogenesis [BR:
sawl03016
]
NGM29_06850
Enzymes [BR:
sawl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NGM29_06850
Messenger RNA biogenesis [BR:
sawl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NGM29_06850
Transfer RNA biogenesis [BR:
sawl03016
]
Prokaryotic type
tRNA degradation factors
NGM29_06850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
UTF54968
UniProt:
A0A9E7NDE6
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All DBs
Position
complement(1425159..1426460)
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AA seq
433 aa
AA seq
DB search
MSDDVQAAAGTAEGQGPVQISEDLARHLENKREDLFEKFEIRDEFPASVLEEAKELTEDP
KADIDAELEDRRDLRDMTTWTTDPIDAQDFDDALSIEEREDEYVLWVHIADVTHYVHPES
EMWNEAVERGNTVYLPAYTIHMLPPVLAESVCSLVPNEERLAHTVEMHLDKETLSYDSID
IYKSVIESDERLTYSQAEQRLEDPDAPLHEENKLVYEVANEMHEIRKEDGSLVLNPSRDR
AHTIIEECMLKANKAVTHELMWSRGVEAMYRVHPQPTPDEWSKALQEIQDLDGVSIPGDT
WDEPRKAVNATLETAPGRQLDKIQWAVMKVMPRAKYMNDPFGGHHALNFEIYGHFTSPIR
RLSDLINHWIVYQNDVPENLVALCDRASDKQKAAETCEREYKQFLQEVGLDPMAVNNRGL
EVVEDAEEADNTL
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatgacgtacaggccgcagccggcacggccgaggggcaaggtcccgtccagatc
tccgaggacctggcccgccacctcgagaacaagcgcgaggacctcttcgagaagttcgag
attcgcgacgagttccccgcgagcgttctcgaagaggccaaggaattgaccgaagatccg
aaagcggacatcgacgcggaactcgaggatcggcgcgacctccgggacatgacgacgtgg
acgaccgaccccatcgacgcccaggacttcgacgacgcgctctcgatcgaagagcgcgag
gacgagtacgtcctctgggtccacatcgcggacgtgacccactacgtccaccccgaatcc
gagatgtggaacgaggcggtcgagcgcggcaacacggtctacctgcccgcctacaccatc
cacatgctgccgccggtgctggccgagtcggtctgctcgctggtccccaacgaggagcga
ctggcccacaccgtcgagatgcacctcgacaaggagaccctgagctacgactccatcgac
atctacaagtccgtcatcgagtccgacgaacggctcacctactcccaggccgaacagcgc
ctcgaggaccccgacgcgccgctgcacgaggagaacaagctcgtctacgaggtggccaac
gagatgcacgagatccgcaaggaagacggctccctcgtcctgaatcccagccgcgaccgc
gcccacaccatcatcgaggagtgcatgctcaaagccaacaaggccgtcacgcacgaactc
atgtggtctcgcggcgtcgaagcgatgtaccgcgtccacccccagccgacacccgacgag
tggtcgaaggccctccaggagatccaggacctcgacggagtctccatccccggcgacacc
tgggacgagccccggaaggcggtcaacgcgaccctcgagaccgcgccgggtcgccaactc
gacaaaatccagtgggcggtgatgaaggtgatgccccgcgcgaagtacatgaacgaccca
ttcggcggccaccacgcgctcaacttcgagatttacggccacttcacaagccccatccgc
cgcctctcggacctgatcaaccactggatcgtctaccagaacgacgtgccggagaacctc
gtcgccctctgtgaccgggccagcgacaagcaaaaggccgccgagacctgcgagcgcgag
tacaaacagttcctccaggaggtcggtctcgatccgatggcggtgaacaaccgcggactc
gaggtcgtcgaggacgctgaagaggcagacaatacgctgtaa
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