KEGG   Natronosalvus rutilus: NGM29_12040
Entry
NGM29_12040       CDS       T08271                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sawl  Natronosalvus rutilus
Pathway
sawl03030  DNA replication
sawl03410  Base excision repair
sawl03420  Nucleotide excision repair
sawl03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sawl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NGM29_12040
   03410 Base excision repair
    NGM29_12040
   03420 Nucleotide excision repair
    NGM29_12040
   03430 Mismatch repair
    NGM29_12040
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sawl03032]
    NGM29_12040
   03400 DNA repair and recombination proteins [BR:sawl03400]
    NGM29_12040
Enzymes [BR:sawl01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     NGM29_12040
    6.5.1.6  DNA ligase (ATP or NAD+)
     NGM29_12040
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     NGM29_12040
DNA replication proteins [BR:sawl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    NGM29_12040
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     NGM29_12040
DNA repair and recombination proteins [BR:sawl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     NGM29_12040
   NER (nucleotide excision repair)
    Other NER factors
     NGM29_12040
   MMR (mismatch excision repair)
    Other MMR factors
     NGM29_12040
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-ProteinID: UTF52519
UniProt: A0A9E7N8L8
LinkDB
Position
2525283..2527106
AA seq 607 aa
MDFATFADHAATIEAEPANLETVAHVRSLLEAAGPDLEVVARFVQGRVFPAWDARKLDIG
PRTCYEAIARAAGTNVGPDDVETAVAEVGEIGAVAASYEFGGQRGLGAFGGGGGSGGGQD
ELTVATVSDTLTELAETDGSGSHDAKVDLLFSLFNRCATDEARYLARLVLSEMRIGVGEG
TVRDATAEAFDVPADRVERALQVSNDYGHVTVVARDEGLEGLDALTLEVGRPVQAMLAQA
GSVTDALEAWDEAAVEWKYDGARVQLHYAPDGVETTGASDGNSGDERPTTRVFSRNMEDV
TDALPEVVEFAEAALEVPTILDGEVVAVDDDGDPLPFQEVLRRFRRKHDVAKAREDVAVR
PVFFDCLHADGEDLLDVPLTDRHDRLEAVLSSEDDPKTETGASEAPNDAAETGATVTTGD
ETPEGLSLLWLTDDPDEIESIDADALESGHEGIMLKDPDSTYSPGRRGKRWLKRKPDVET
LDCVVTGAEWGEGRRGTFLGTFLLSVRATDTSGDGAFETIGKVATGITDETLAELTERLE
PYVRAEDGKDVDLEPAVVFEVGYEEIQTSPTYSSGYALRFPRFLGIREDKTPSEADSLER
VERLRSP
NT seq 1824 nt   +upstreamnt  +downstreamnt
atggacttcgccacgttcgccgaccacgccgccaccatcgaggccgaacccgcgaatctc
gagaccgttgcgcacgtccggtcgctcctcgaggcagctggcccggacctcgaggtcgtc
gcccgcttcgttcagggacgggtgttccccgcctgggacgcccgaaagctcgacatcggc
ccgcggacgtgctacgaggcgatcgctcgcgcggccgggacgaacgtcggcccggacgac
gtcgagacagccgtcgccgaggtcggcgagatcggcgccgtcgccgcgagctacgagttc
ggcggccagcgggggctgggggcgttcggcggcggtggcggcagtggcggcggccaggac
gaactcaccgtcgcgacggtatccgacacgctcacggaactggccgaaaccgacggctcg
ggcagccacgatgcgaaggtggacctcctgttctcgctgttcaaccggtgtgcgaccgac
gaggcccgctacctcgctcgccttgtcctctcggagatgcgcatcggcgtcggcgaaggg
accgtccgcgacgccaccgcggaggcgttcgacgtccccgccgaccgcgtcgagcgcgcg
ttgcaggtctcgaacgattacggccacgtcactgtcgtcgcgcgagatgaggggctcgag
gggctggacgcgctcaccctcgaggtcgggcgcccggtccaggcgatgctcgcccaggcg
gggagcgtgaccgacgccctcgaggcctgggacgaggcggccgtcgagtggaagtacgac
ggggcgcgcgtccagttgcactacgcgcctgatggcgtcgagacgacgggtgcgtccgac
gggaactcgggggacgaacgaccgacaacgcgcgtcttctcgaggaacatggaggacgtg
accgacgcgctcccggaggtcgtcgagttcgccgaagcggctctcgaggtgccgacgatc
ctggacggcgaggtggtcgccgtcgacgacgacggggacccgctcccgttccaggaggtg
ctccggcgatttcgacggaaacacgacgtggcgaaagcgcgcgaggacgtggccgtccgg
cctgtcttctttgactgtctccacgccgatggcgaggacctgctcgacgtcccgctcacg
gatcgccacgaccgactcgaggcagtgctctcgtccgaggacgaccccaaaacggagacg
ggcgcgtccgaagcgcccaatgacgccgctgaaacgggagcgaccgtgacgacaggggat
gagacgcccgagggcctctcgctcctctggctcaccgacgaccccgacgagattgaatcg
atcgacgccgacgcgctcgagagcggtcacgaggggatcatgctcaaggaccccgactcg
acgtactcgccaggccggcgcggcaagcgctggctgaagcggaaacccgacgtcgagacg
ctcgactgcgtcgtcaccggcgcggagtggggtgaaggccggcgtggaaccttcctcggc
acgttcctgctgtccgtgcgggcgacggacacctccggagatggcgcgttcgagaccatc
ggcaaggtcgccacggggatcaccgacgagaccctcgcggagctgaccgagcgcctcgag
ccgtacgtccgcgccgaggacggcaaggacgtggatctcgagcccgcggtcgtgttcgag
gtgggctacgaggagatccagacctcgccgacgtacagttcggggtacgcgctccgattc
ccccggtttctcgggatcagggaggacaaaacgccgtccgaggcggactccctcgagcgc
gtcgaacggctccggtcgccgtga

DBGET integrated database retrieval system