Shewanella amazonensis: Sama_0207 Help Entry Sama_0207         CDS       T00445                                  Name (GenBank) DNA-directed RNA polymerase   KO K03046   DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6] Organism saz  Shewanella amazonensis Pathway saz03020   RNA polymerase Brite KEGG Orthology (KO) [BR:saz00001]  09120 Genetic Information Processing   09121 Transcription    03020 RNA polymerase     Sama_0207  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:saz03021]     Sama_0207    03400 DNA repair and recombination proteins [BR:saz03400]     Sama_0207 Enzymes [BR:saz01000]  2. Transferases   2.7  Transferring phosphorus-containing groups    2.7.7  Nucleotidyltransferases     2.7.7.6  DNA-directed RNA polymerase      Sama_0207 Transcription machinery [BR:saz03021]  Prokaryotic type   Bacterial type    RNA polymerase     Core subunits      Sama_0207 DNA repair and recombination proteins [BR:saz03400]  Prokaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     TCR (transcription coupled repair) factors      DNA-directed RNA polymerase complex (RNAP)       Sama_0207 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 RPOC_hybrid Peptidase_M23 Apocytochr_F_C Motif Other DBs NCBI-ProteinID:  ABL98418 UniProt:  A1S212 LinkDB All DBs Position 242768..246982 Genome browser AA seq 1404 aa AA seqDB search MKDLLKFLKQQGKTEEFEGIKIGLASPDLIRSWSFGEVKKPETINYRTFKPEREGLFCAR IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELASPVAHIWFLKSL PSRIGLMLDMTLRDIERVLYFESYVVIEPGMTSLERGQMLTEENYLDALEEYGDEFEAKM GAEAVLDLLRAIDLEKEIEQMREELPSINSETRRKKVTKRLKLIEAFYTSGNKPEWMILK VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ ESVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPT LRLHQCGLPKKMALELFKPFIYGKLEGRGLATTIKAAKKMVEREVAEVWDVLDEVIREHP VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA RALMMSTNNILSPANGEPIIVPSQDVVLGLYYISRERVNGRGEAMAFESVAEAEKAYRVG AAELHARVKVRITETIIGENGERTKQRRIVDTTVGRAILSQILPAGLSFDLVNQDMGKKQ ISKLLNTCYRQLGLKDTVIFADQLMYTGFQYATISGASVGINDMVIPEEKYSLVADAEAE VIEIQEQFQSGLVTAGERYNKVIDIWASANEKVSKAMMENLSSETVINRHGEEEKQKSFN SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPIVANFREGLNVLQYFISTHGAR KGLADTALKTANSGYLTRRLVDVAQDLVIIEDDCGATEGLSMKPLIEGGDVVEPLRERVL GRVVAEDVMYPGTDEVLAPRNTLLDEAWCDKLEQHSVDEVQVRSVITCETDFGVCAKCYG RDLARGHIINMGEAIGVVAAQSIGEPGTQLTMRTFHIGGAASRASAENSVQVKNAGTLKL HNAKYVTNSDGKLVIVSRSSELAIIDELGREKERYKVPYGTVLDTKEGAEVNAGQIIANW DPHTHPIITEVAGSIKFVDMIDGVTITRQTDELTGLSSIVVLDVGQRTSAGKEMRPAVRL VDDNGNDLTIPGTDVPAQYFLPGNAIVNLDDNAKISVGDALARIPQESSKTRDITGGLPR VADLFEARRPKEPAILAEISGTISFGKETKGKRRLVITPNDGGDAYEEMIPKWRNLNVFE GEKVERGEVIADGPESAHDILRLRGIHNVANYIVNEVQDVYRLQGVKINDKHIEVIIRQM LRKCIITQAGDSEFLEGEQVEVARVKIANRDLEAAGKQPAKFERELLGITKASLATESFI SAASFQETTRVLTEAAVGGKSDNLRGLKENVIVGRLIPAGTGFAYHKNRAKARASGEETA APTITASEAEQNLADLLNLAGSQE NT seq 4215 nt NT seq  +upstreamnt  +downstreamnt gtgaaagacttattaaagtttctgaaacagcagggtaagaccgaagagtttgaaggtatc aagattggtctggcttcacctgacctgatccgttcatggtcttttggtgaagttaaaaag ccagaaaccattaactaccgtacctttaagcctgagcgtgaaggtctgttttgtgcccgc atctttggtcctgtgaaggactatgagtgtctgtgtggtaagtacaagcgtctgaagcat cgcggtgtcatctgtgagaagtgcggcgttgaagttacccagaccaaggtgcgccgtgag cgcatgggtcacatcgagctggccagcccagttgcccacatctggttcttgaagtcactg ccgtcccgtatcggtttgatgctggatatgacgctgcgtgacatcgagcgcgtgctgtat ttcgaatcttatgtcgtaattgagccaggcatgaccagcctggagcgcggtcagatgctg accgaagaaaactacctggatgcgctggaagaatacggtgatgaattcgaagccaaaatg ggcgccgaagccgtattggatctgctgcgtgccatcgacctcgagaaagaaatcgagcag atgcgcgaagagctgccttccatcaactctgagacccgtcgcaagaaagtgaccaagcgt ctgaagctgattgaagccttctacacttctggcaataagccagagtggatgatcctcaaa gtactgccagttctgccaccggatctgcgtccgttggttccgctggacggcggtcgtttc gcgacttcggatctgaacgatctgtatcgccgcgtcatcaaccgtaacaaccgtctgaag cgtctgctggatctggctgctccggatatcatcgtacgcaacgaaaagcgtatgctgcag gagtctgtggatgcgctgctggacaacggccgtcgtggccgtgccattaccggttccaac aagcgtcctctgaaatccctggccgacatgatcaagggtaagcaaggtcgtttccgtcag aacctgctgggtaagcgcgttgactactcaggccgttcggttattaccgtaggtcctact ctgcgtctgcatcagtgcggtctgccaaagaaaatggctcttgagctgttcaagcccttc atctacggcaagctggaaggtcgtggcctggccaccaccatcaaagccgccaagaagatg gtagagcgtgaagttgccgaggtttgggacgtactggatgaagtgatccgcgaacaccca gtaatgctcaaccgtgcaccaacactgcaccgtctgggtattcaggcgttcgaacctgta ctgattgaaggtaaggcaatccaactgcacccactggtgtgtgcggcatacaacgccgac ttcgacggtgaccagatggcggtacacgtacctctgactctggaagctcagctggaagcc cgtgcgctgatgatgtctaccaacaacatcctgtcgccagccaacggtgagccaatcatc gttccttctcaggacgtggtattgggtctgtactacatcagccgtgagcgtgtaaacggt cgcggtgaagccatggcgttcgagtctgttgctgaagctgaaaaagcctaccgtgtaggt gctgccgagctgcacgcccgcgtgaaagttcgtattaccgaaaccatcattggtgaaaac ggtgagcgtaccaagcagcgtcgtatcgttgacaccacagtgggtcgtgccatcctgtcg caaatcctgccagccggtctgtctttcgacctggtaaaccaggacatgggcaagaagcag atctccaagctgctgaacacctgttaccgtcagctgggtctgaaagataccgttatcttc gccgaccaactgatgtacaccggtttccagtacgccaccatctccggtgcctctgttggt attaacgacatggttatcccagaagagaaatactctcttgtggccgatgccgaagccgaa gttatcgagatccaggaacagttccagtctggtctggtaaccgccggtgagcgttacaac aaggtcatcgatatctgggcaagtgccaacgagaaggtgtccaaggcgatgatggaaaac ctgtcttccgagacagtgatcaaccgtcatggcgaagaagaaaagcagaagtcgttcaac agcatctacatgatggccgactcaggcgcgcggggtagtgccgctcagatccgtcagttg gcgggtatgcgtggtctgatggccaagccagacggctccatcattgaaacgcccatcgtg gcgaacttccgtgaaggtctgaacgtactccagtactttatctctacccacggtgctcgt aagggtctggcggatactgcacttaagacagcgaactccggttacctgactcgtcgtctg gtggatgtggcccaggatctggtgatcatcgaagacgattgtggcgcgaccgaaggtctg tccatgaagccgctgattgaaggtggtgacgtggttgagccgctgcgtgagcgcgtactg ggtcgtgtagttgctgaagacgttatgtacccaggtaccgacgaagtgctggcacctcgc aacaccctgctggacgaagcctggtgtgacaagctcgaacagcacagcgttgacgaagta caggttcgctccgtaattacctgtgaaaccgactttggtgtgtgtgccaagtgttatggg cgtgacttggcccgtggtcacatcatcaacatgggtgaagccatcggtgtggttgcagcc cagtcaatcggtgaaccaggtacacagctgacgatgcgtacgttccacatcggtggtgcg gcatcccgagcgtctgccgaaaacagcgtacaggtgaagaacgccggtactctgaagctg cacaatgccaagtacgtaaccaacagcgacggcaaactggttatcgtgtctcgttcttct gagctggccatcatcgatgagctgggtcgtgagaaagagcgctacaaggtgccttacggt accgtgcttgacaccaaagaaggtgccgaggtgaatgctggccagatcattgcgaactgg gatccgcacactcacccaatcatcactgaagtggcaggtagcattaagttcgtagacatg attgacggtgtaaccattacccgtcagaccgacgaactgaccggtctgtcttcaatcgtc gtactggacgtgggtcagcgtacctctgccggtaaagaaatgcgtccagcagtacgtctg gtggatgacaacggcaacgacctgactatcccaggcaccgacgttccggcgcagtacttc ctgcctggtaacgcgattgtgaacctggacgacaacgccaagatcagcgtgggtgacgcc ctggctcgtattcctcaggaatcgtccaagacccgcgacatcaccggtggtctgccacgg gttgctgacttgttcgaagcccgtcgtccaaaagagcctgctattctggccgaaatcagc ggtactatctccttcggtaaagaaaccaagggtaagcgccgtctggttatcaccccgaac gacggtggcgatgcttacgaggaaatgattcctaagtggcgtaacctgaacgtgttcgaa ggtgaaaaggttgagcgtggtgaagttatcgcagacggtccagagtcagcccatgacatt ctgcgcctgcgtggcatccacaacgtggccaactacattgtgaacgaagtacaggacgtt taccgtctgcagggtgtgaagatcaacgacaagcacatcgaggtgatcattcgccagatg ctgcgtaagtgcatcatcacccaggccggtgactctgagttcctggaaggtgagcaggta gaagtagctcgcgtgaagattgccaaccgcgatctggaagctgccggtaagcagccagct aagttcgaacgcgaactgctgggtattaccaaggcatctctggcgactgagtccttcatc tctgcggcctcgttccaggaaaccactcgcgttcttaccgaagcggctgttggcggtaag tccgacaacctgcgcggtctgaaagagaacgttattgtgggtcgtctgatccctgccggt accggttttgcttaccacaagaatcgcgccaaggcgcgtgcttctggtgaagaaactgcg gctccgaccattactgccagcgaagctgagcagaacctggcggatctgctgaatctggcc ggtagccaagagtaa

DBGET integrated database retrieval system