Shewanella amazonensis: Sama_2452
Help
Entry
Sama_2452 CDS
T00445
Name
(GenBank) glycogen operon protein
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
saz
Shewanella amazonensis
Pathway
saz00500
Starch and sucrose metabolism
saz01100
Metabolic pathways
saz01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
saz00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Sama_2452
Enzymes [BR:
saz01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
Sama_2452
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
GlgX_C
Motif
Other DBs
NCBI-ProteinID:
ABM00657
UniProt:
A1S8F0
LinkDB
All DBs
Position
complement(2955205..2957274)
Genome browser
AA seq
689 aa
AA seq
DB search
MSDLHRQCGVWLFNEDGVSKAHFGVFSRHASAVFLCLFDEEGREFSYPMKRRGDFWSLTL
DGIGEGQAYGYRADGPWAPAAGHRFDPAKLLLDPYALAIDGLPTLAVAQAAQGSAGPQDP
HFAPTPDGADNATLMPRCRVVDVAALPPFVHPKPGYAMEESVIYELHVKGFSMGFPGVKP
EHRGRFAALAAPEVIQYLKRLGVTALELMPCQQFFDEPFLHAKGLSNYWGYNSIGFFAPH
NAYGDIREFRAMVDALHGAGIEVILDVVYNHSAEGNAMGPVYSFKGLDNACYYRLTDTGH
YINDTGCGNTLDLGQPRVLELVMDSLRYWALVGGVDGFRFDLAACLGRMPHGFDTHSGFF
AALGQDPVLKHLKLIAEPWDVGPGGYRLGDFPAAFAEWNDKYRDAMRRLWRGDEQILGEF
ARRFHGSADLFEPSFRGPWASVNFIASHDGFTLRDLLSYEQRHNLANGEDNRDGHQENLS
HNFGVEGEATELVAARKHKARAMLVTLFFSFGIPMLRAGDELWQTQQGNNNAYCQDNALT
WIDWESADTELIDFVAGLIHIRRKLPLLAATRYIHGNNPDDGRKGPFLAWFNESGLPMAG
TDWHRCGPLIAALGEHHPLRGSELLLILINPSQSAVDISLPLFAVWEQLHSLCGNSDMPA
RIEAGDTLTLPGVSIWIFHGHRDADPGTQ
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatttgcaccggcaatgcggggtttggctctttaacgaagatggcgtcagcaag
gcgcacttcggggtgttcagtcgccatgccagcgctgtgttcctgtgcctattcgatgaa
gaggggcgggagttttcctatcccatgaagcgccgtggtgatttttggtcactgactctg
gatggcattggcgaggggcaggcctatggttaccgcgccgatggtccctgggcgccggcg
gctggtcacaggtttgacccggctaaattgctcctggacccctatgccctggcgattgat
ggtttgccaacgctggcggttgcccaggcggctcagggctcggccggtccacaggacccg
cattttgcgcccactccagatggggcagacaatgccaccctgatgccaagatgcagggtg
gtggatgtggctgccttgccgccctttgtgcatcccaaacccggttatgccatggaagag
agcgtgatttacgagcttcatgtgaagggattttccatgggttttcccggggtgaagcca
gagcacagaggccgctttgccgccctcgcagcacctgaggttatccaatatctgaagcgg
ctgggggtcacggctctggagctgatgccctgccagcagtttttcgatgagcccttttta
catgccaaaggcctgtccaattattggggttataacagcatcggctttttcgccccccac
aatgcctatggcgacatccgcgagttcagagccatggtggatgccctccatggcgccggt
atcgaggtcattctggatgtggtctacaaccacagcgccgaaggcaatgccatggggccg
gtatacagcttcaaggggctggacaatgcctgctattaccgcctcaccgatactggccat
tacatcaatgataccggctgcggcaacaccctggatttggggcagcccagagtgcttgag
ctggtgatggactcactgaggtactgggctttggtcggcggagtcgacggatttcgcttc
gatttggccgcctgtctgggccgtatgccccatggctttgatacccacagtggctttttt
gccgcgctcgggcaggaccctgtgcttaaacacctcaagcttatcgccgagccctgggat
gtgggccccggtggttatcgcctcggcgacttccccgccgcctttgccgagtggaatgat
aagtatcgcgatgccatgcgcagactctggcgtggcgatgagcaaattctgggtgaattt
gcccggcgttttcatggctcggcggatctcttcgagccctccttccgtggtccctgggcc
agtgtcaattttatcgccagtcacgatggtttcaccctgagggatctgctgagttacgag
cagcgccacaaccttgccaacggtgaagacaatcgcgatggccatcaggaaaacctgagc
cacaacttcggcgtggaaggagaggccaccgagctggtggcggcccgaaaacacaaggcc
agggcgatgctcgttaccctgtttttctcctttgggatacccatgctgcgggccggagat
gagctgtggcaaacccagcagggcaacaacaatgcctactgtcaggacaatgcactcacc
tggattgattgggaaagcgccgacactgagctcatcgactttgtggccgggcttatccat
atccggcggaagctgccgctgctcgcggccacccgttatatccatggcaataacccggac
gatggccgcaagggtccgtttctggcctggttcaacgagtccggcctgcccatggcgggc
accgactggcatcgctgcggcccgcttatcgctgcgctgggtgagcatcatcctctgcgg
ggctcggagctgttactgattttgataaaccccagtcagtcggcggtggacatcagtctg
cccctgtttgccgtgtgggagcaattgcacagcctgtgcggtaacagcgatatgccggcg
cggatagaggcgggcgacaccctgacgctacccggcgtcagtatctggatttttcacgga
cacagggatgccgaccccggcactcaataa
DBGET
integrated database retrieval system
