KEGG   Stygiolobus azoricus: D1868_00900
Entry
D1868_00900       CDS       T06313                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
sazo  Stygiolobus azoricus
Pathway
sazo03030  DNA replication
sazo03410  Base excision repair
sazo03420  Nucleotide excision repair
sazo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:sazo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D1868_00900
   03410 Base excision repair
    D1868_00900
   03420 Nucleotide excision repair
    D1868_00900
   03430 Mismatch repair
    D1868_00900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sazo03032]
    D1868_00900
   03400 DNA repair and recombination proteins [BR:sazo03400]
    D1868_00900
Enzymes [BR:sazo01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     D1868_00900
    6.5.1.6  DNA ligase (ATP or NAD+)
     D1868_00900
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     D1868_00900
DNA replication proteins [BR:sazo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    D1868_00900
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     D1868_00900
DNA repair and recombination proteins [BR:sazo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     D1868_00900
   NER (nucleotide excision repair)
    Other NER factors
     D1868_00900
   MMR (mismatch excision repair)
    Other MMR factors
     D1868_00900
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase EF1G
Other DBs
NCBI-ProteinID: QGR18695
UniProt: A0A650CLY6
LinkDB
Position
complement(166823..168628)
AA seq 601 aa
MEFKLIAEYFDKLERISSRIQITSLLTDLFKKSDKDVIDKVIYIIQGKLWPDFYGYPEIG
LGEKLMIKALSIGINVKEDTIEAELKKVGDLGEVAYRLKKSGSGTTILTFLGASSSSPLT
VEEVYNSLSKIALAEGEGSRDVKIRSLAGLLKKADPLEAKYIIRFIDGRLRVGIGDATIM
DALANAYGGGPHARPIIERAYNLRADLGNIAKVVASEGIEALKNLKPEVGIPIRPMLAER
LNDPVEILSKVGGQALVDYKYDGERAQIHKKGNEIYIFSRRLENITKQYPDVRDYVKDYI
DADEVIIEGEIVAIDKESGDILPFQELMHRKRKNDIHEAVEEYPVNVYLFDLMYYNGEDY
TLKPLPERRKKLEEIIKPNDKLHVAHHIFTDDVEKLKEYFYQAISEGAEGIMVKAVGKDS
IYQAGARGFLWIKLKRDYQSEMADSVDLVVVGAFYGRGKRGGKLSSLLMAAYDPETDTFY
TVCKVASGFSDAELDELQKKLMEIKMDSKDPRVESEMEPDIWVQPKYVAEVIGAEITLSP
QHTCCKGQVSKEAGLSIRFPRFIRWRDDKSVEEATTPQEILEMYKLKLKKKEDSSGETQP
S
NT seq 1806 nt   +upstreamnt  +downstreamnt
atggagtttaaactaatcgctgaatattttgataaactcgagagaatatcttcaaggata
caaataacttcgttgttaactgacttgtttaagaaatcagataaagatgtaatagataaa
gttatttatataattcagggaaaactatggcctgacttttatggttatccagaaataggt
ctcggagaaaagttaatgataaaggctttatccatagggataaacgtcaaggaggataca
atcgaagccgaacttaaaaaggtaggtgacttgggtgaagtagcctataggctgaaaaag
tcaggcagcggaacgacaattttaacattcttaggtgcttcgtcatcttctcccctaact
gttgaggaagtatataactctctaagtaagattgctttggctgagggcgaaggaagtagg
gacgtaaaaattcgctccctagctggtttattaaagaaggccgatcctctggaagcgaaa
tacattataaggttcatagatgggagattgagggttggtataggagatgcaacaattatg
gacgcccttgctaacgcctatggaggtggtcctcacgcacgtccaataatagaaagggct
tacaatctaagggctgatcttggtaacatagctaaagtagtggcttcggagggtattgaa
gcgttaaagaatctaaagcctgaagtaggaataccaataagaccgatgctagcagaaagg
ctcaacgacccggttgaaatattatcaaaagttggaggtcaagcgttagtagattataaa
tatgacggggaaagggctcaaattcacaagaaaggtaatgagatttatatattctcaaga
aggctcgaaaatattactaagcagtatcccgacgtaagagattatgttaaagactatatc
gatgcagatgaggtgataatcgaaggcgagatagtggctatagataaagaaagtggagac
attttacctttccaagagttaatgcataggaagagaaaaaacgatatacacgaggcggtt
gaggaatacccagtaaatgtctaccttttcgacttaatgtattataacggagaggattac
actctgaaacctttgccagagaggagaaagaagctcgaggaaataataaagcccaacgac
aagttgcacgttgctcatcatatatttacagatgacgtcgaaaaactgaaagagtacttc
tatcaggctatctcggaaggcgcagagggaataatggtgaaggctgtaggtaaagactca
atatatcaggcaggagctagggggttcttgtggataaaactcaagagagactatcagagc
gagatggctgacagcgttgacctagtagttgttggtgctttttacgggagaggtaagaga
ggaggaaaattaagctcactactaatggcagcttacgaccctgagactgacacattttat
acagtatgtaaagttgcctcgggtttcagcgatgcggaactggatgagctacaaaagaaa
cttatggagatcaaaatggactccaaagacccgagagtagagtcagagatggaaccagat
atatgggttcaaccaaagtatgtggctgaggtgataggtgcggagataactctttcccct
cagcatacctgctgtaagggtcaagtaagcaaggaagcagggctctcaataagatttccc
aggtttataaggtggagggatgataagagcgtagaagaggctaccacaccacaagagatc
ttagagatgtataagttgaagctgaagaaaaaagaggattcaagcggagaaacgcaacct
tcctaa

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