Sulfurospirillum barnesii: Sulba_1594
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Entry
Sulba_1594 CDS
T02139
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
sba
Sulfurospirillum barnesii
Pathway
sba02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sba00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Sulba_1594
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sba03021
]
Sulba_1594
Transcription machinery [BR:
sba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Sulba_1594
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Sp-CxC
MCR_beta_N
Motif
Other DBs
NCBI-ProteinID:
AFL68882
UniProt:
I3XY58
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Position
1564362..1566212
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AA seq
616 aa
AA seq
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MASKELYTELEELFTENEKAYVTYENVMELFTKPPTSANVKKMMSLIDKYKVTLISSAEI
AKLRNKEEAKKREEERQKLQDEALEDEFDLASEKELLEWSRSDSPVRMYLREMGQISLLT
KDEEIDISKKIEFGEDIIIDAFCSVPYLIDFILDYKEALINRERRVKELFKTFEDDDDSD
DGDDGDDEFEEDGEEKRTLSKKDNSRTEKVIESFKALEKAKKDWMKSFARPPEENLDAEE
MMNYDLNLAYKKKLLKDALMDLGPTSKLINELVKSMETALKSDFEFDKELKRLEYRLPLF
NDTLKENHLNLLKNIIDLNKEDIAVMVPEATMVSTYMEIKKLFQTKEASKQGFDLDPEKL
KEILEQIKRGKKIADESKTRMAKSNLRLVVSIAKRYTNRGLPFLDLIQEGNIGLMKAVDK
FEYKKGYKFSTYATWWIRQAISRAIADQARTIRIPIHMIETINRINKIIRKHLQEEGKEP
DIETIAEEVGLSADKVKNVIKITKEPISLEAPIGNEDDGKFGDFVEDKTSIAPMDHILKS
DLKEQIDDVLDQLNDREKAVIRMRFGLMHDESDRTLEEIGKELNVTRERVRQIESSAIKK
LKHPKVGRKLKNYIES
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcctcaaaagaactctatacagaattagaagaactttttacagaaaatgaaaaagcg
tacgtcacctatgaaaatgtgatggaactctttacaaaacctccaacctccgccaacgtc
aaaaaaatgatgagtttaattgacaaatacaaagtcacactgatctcctcagctgaaatt
gcaaaactgcgaaacaaagaagaggcaaaaaaacgtgaagaagagcgtcaaaaacttcaa
gatgaagccctcgaagacgaatttgatcttgccagtgaaaaagagcttttagagtggtca
cgcagtgatagtcctgtacgtatgtatttacgtgaaatggggcaaatttcacttttaacc
aaagatgaagagattgatattagtaaaaaaattgaatttggtgaagatattatcattgat
gccttttgttcagtgccttatcttatcgactttattttagattataaagaagccttaatc
aatcgtgaacgccgtgttaaagagcttttcaaaacatttgaagacgatgatgatagcgat
gatggcgatgatggcgatgacgagtttgaagaagatggggaagagaaacgtaccctttca
aaaaaggacaactcacgtacagaaaaagttattgaaagctttaaagcattagaaaaagcc
aaaaaagattggatgaaaagttttgcacgtccacctgaggaaaatcttgatgccgaagag
atgatgaactatgatcttaatcttgcgtataagaaaaaattgcttaaagatgcgttgatg
gatttaggacctacgagtaaactcattaatgaactcgttaaatcaatggaaacagccctt
aaaagtgattttgagtttgataaagaactcaaacgattagagtatcgtttaccacttttt
aacgatacgctcaaagagaaccatcttaatttacttaaaaatattatcgatttaaacaaa
gaagatattgctgtcatggttccagaagccaccatggtttcaacgtacatggaaattaaa
aaacttttccaaaccaaagaagccagcaaacaagggtttgatttggaccctgaaaaactc
aaagagattttggagcaaatcaaacgaggtaaaaagattgccgatgagtctaaaacacgc
atggcaaaaagtaaccttcgtctggttgtttctattgcaaaacgttacaccaaccgagga
ttaccatttcttgacttaattcaagaaggaaatattggtttaatgaaagccgttgataaa
tttgaatacaaaaaagggtacaaattttcaacctatgcgacatggtggattcgtcaagct
atctcacgtgcgattgcggatcaagcacgtaccattcgtattcctattcatatgattgag
accatcaaccgtatcaataaaatcatccgtaaacacttacaagaagaaggcaaagagccc
gatattgaaaccattgctgaagaagtgggcttgagtgcggataaggtcaaaaatgtcatt
aaaatcaccaaagagcctatttctttagaagcacctattggcaatgaagacgatggcaag
tttggggattttgtggaagataaaacctctattgcgccgatggatcatattttaaaatcg
gaccttaaagagcaaattgacgatgttcttgaccaacttaacgacagagaaaaagcggtt
attcgtatgcgttttggtttgatgcacgatgaaagcgatagaaccctagaagagattggc
aaagagctcaatgtcactcgtgaacgtgttcgtcaaatcgaaagttctgccattaaaaag
ctcaaacatccaaaagtgggaagaaaacttaaaaattatattgaaagctaa
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