Capillimicrobium parvum: DSM104329_04323
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Entry
DSM104329_04323 CDS
T08390
Symbol
lig
Name
(GenBank) DNA ligase
Organism
sbae
Capillimicrobium parvum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
DNA_ligase_A_C
LigD_N
Motif
Other DBs
NCBI-ProteinID:
UGS37901
UniProt:
A0A9E6Y0W0
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Position
4460399..4462570
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AA seq
723 aa
AA seq
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MPNGIPDDPKRNRKAIRTEDHPLEYLEFHGEIPRGQYGAGTMTIWDSGTYEAEKWRDDEV
IATFHGERLRGRYALIRTGADGKDWLMHRMDPAVDPGAEPMPEAIVPMLAKPGRLPGGRP
GSEGDRWSYEIKWDGVRALVYSEPGRLRLESRNGRDITASYPELRPLNRALSHHRAILDG
EIVAFDADGRPSFARLQQRMHLTGESQVRRRARDVPVVLVLFDLLWLDGHSLMDRPYDDR
RGALEALDLSGPAWQTPAAHLGDGAALLQATAAQGLEGLIAKRRDAPYEPGRRSSCWIKV
KNVNRQEVVIAGWLPGEGRRESRIGALVVGVHDEDGGPLRYAGRVGTGFTEQALDALAET
LGPLRTDENPFGRGGPKGAIWVRPCLLAEVEFTEWTTEGLLRHPSFKGLREDKDALEVVR
ELPGDARELHLEGQVVKVSNWSKVLWPQTGFTKGRLVDYYLRIAPAILPHLEGRPLTLKR
YPNGVDAQHFYEKNSPSHRPEWVHTARVSTGRKAIDFTLVENVATLGWLANLASIELHTS
LSRADPIERPTMLVFDLDPGPPADIVACCEVGLILRGLFDGLGLVSAAKTSGSKGLQVYV
PLNEPDLTYDDTKPFAKAVAELLEAQVPDLVVSRQTKTLRPGKVLVDWSQNDEHKTTVCV
YSVRAKERPTVSTPVDWDEVQACHDAGDPELLVFDTDAVLDRVAERGDLFAPTLSVVQRL
PKL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgcccaacggcatccccgacgacccgaagcgcaaccgcaaggcgatccgcaccgaggac
cacccactcgagtacctcgagttccacggcgagatcccgcgcggccagtacggcgcgggg
acgatgaccatctgggactcgggcacgtacgaggcggagaagtggcgcgacgacgaggtg
atcgcgaccttccacggcgagcggctgcggggccggtacgcgctgatccggaccggcgcc
gacggcaaggactggctcatgcaccgcatggacccggcggtcgaccccggggccgagccg
atgcccgaggcgatcgtcccgatgctcgccaagccgggcaggctgccgggtgggcggccc
gggtccgagggcgaccggtggtcctacgagatcaagtgggacggggtgcgggcgctcgtg
tactccgagcccgggcgcctgcggctcgagtcgcgcaacggccgcgacatcacggcgtcc
tatccggagctgcggccgctgaaccgcgcgctcagccaccaccgcgcgatcctcgacggc
gagatcgtcgcgttcgacgccgacgggcggccgagcttcgcccgcctgcagcagcggatg
cacctgacgggcgagagccaggtgcgccgcagggcgcgcgacgtcccggtcgtcctcgtg
ctcttcgacctcctgtggctcgacgggcactcgctcatggaccggccctacgacgaccgg
cgcggggcgctcgaggcgctggacctcagcgggccggcgtggcagacgccggccgcgcac
ctcggcgacggcgcggcgctgctccaggcgacggccgcccagggcctcgaggggctcatc
gccaagcggcgcgacgcgccgtacgagcccgggcggcgctcgtcatgctggatcaaggtc
aagaacgtcaaccgccaggaggtcgtgatcgccggctggctgcccggcgaggggcggcgc
gagagccggatcggcgcgctcgtcgtcggcgtgcacgacgaggacggcggcccgctgcgc
tacgccgggcgggtgggcaccgggttcaccgagcaggcgctcgacgccctcgccgagacg
ctcggacctctgcgcaccgacgagaacccgttcggccgcggcgggccgaagggggcgatc
tgggtgcggccgtgcctgctggcggaggtcgagttcaccgagtggacgaccgagggcctg
ctgcgccacccctcgttcaagggcctgcgcgaggacaaggatgcgctcgaggtcgtgcgc
gagctcccgggcgacgcccgcgaactgcacctcgagggccaggtggtcaaggtctcgaac
tggtcgaaggtgctgtggccgcagacggggttcaccaaggggcggctcgtggactactac
ctgcgcatcgcaccggcgatcctgccgcacctcgaaggccggccgctgaccctcaagcgc
tacccgaacggcgtcgacgcgcagcacttctacgagaagaactcgccgtcgcaccggccg
gagtgggtgcacacggcgcgcgtctcgaccgggcgcaaggcgatcgacttcacgctcgtc
gagaacgtcgcgacgctcggatggctggccaacctcgcctccatcgagctgcacacgtcg
ctgtcacgcgcggaccccatcgagcgcccgacgatgctcgtgttcgacctcgaccccggc
ccgccggccgacatcgtggcctgctgcgaggtcggcctgatcctgcgcgggctgttcgac
gggctcgggctcgtgtcggccgccaagacctccggctccaaggggctgcaggtctacgtc
ccgctcaacgagccggacctcacgtacgacgacaccaagccgttcgccaaggcagtcgcc
gagctgctcgaggcgcaggtgcccgacctggtcgtctcacgccagacgaagacgctgcgg
ccgggcaaggtgctcgtcgactggtcgcagaacgacgagcacaagacgaccgtctgcgtc
tactccgtgcgggcgaaggagcgccccacggtgtcgacgccggtcgactgggacgaggtg
caggcctgccatgacgcgggcgacccggagctgctcgtcttcgacaccgacgcggtcctc
gacagggtggccgagcgcggcgatctcttcgcccccacgctgagcgtcgtccagcggctg
ccgaagctgtag
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