Capillimicrobium parvum: DSM104329_04440
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Entry
DSM104329_04440 CDS
T08390
Symbol
ligB
Name
(GenBank) DNA ligase B
Organism
sbae
Capillimicrobium parvum
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
DUF3813
HMGL-like
Motif
Other DBs
NCBI-ProteinID:
UGS38018
UniProt:
A0A9E6Y1N5
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Position
complement(4580898..4582436)
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AA seq
512 aa
AA seq
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MARVLLADLAHTSDVIGATRSRTAKTTELAAALAHLRPDEIEAGVAFLSGELRQRQIGVG
WAALGDVPAPSSTGPPTLAVHDVDAAFDAIGRTSGPGSQAARKQALHALFAQATPAEQTY
LRRLLGGDLRQGALEGLMVQALAKATATTPARVQRAFMLRGDLAPVAHAALTEGPNALDR
FTLEVGRPVRPMLARPAKDVDDAFGKLKDAPAAAEAKLDGARIQVHRSGSDVAVFTRSLD
DVTARVPEIVVAARALPVADVVLDGEAIALKPGGRPQPFQVTASRFATSSKTPAIALTPF
LFDVLRLDGNDTIDLPGRERAALLAELVPHNQRTPREPVTTTRQARDFLARTLDAGHEGI
MLKALDAPYAAGSRGAGWLKVKPVHTLDLVVLAAEWGHGRRRGWLSNLHLGARDPGDSTA
TSFVMLGKTFKGLTDEMLAWQTRRLLELETARTRYAVQVRPELVVEIAFDGIQTSPRYPG
GVALRFARVIRHRPDKPAAEADTLDAVLSVAG
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgggtgctgctcgccgacctcgcgcacacctcggacgtcatcggcgcgacccgc
tcgcgcacggcgaagacgaccgagctcgccgccgcgctcgcccacctccggccggacgag
atcgaggccggcgtcgcgttcctctcgggcgagctcaggcagcgccagatcggcgtgggg
tgggccgcgctgggcgacgtcccggccccgagcagcaccggcccgccgacgctggccgtc
cacgacgtcgacgccgcgttcgacgcgatcggccggacgagcggacccggctcgcaggcc
gcgaggaagcaggcgctccacgccctgttcgcccaggccacgcccgcggagcagacctac
ctcagacgtctcctcggcggcgacctgcgccagggcgcgctcgaaggcctcatggtccag
gcgctcgccaaggccaccgcgaccaccccggcgcgcgtccagcgcgccttcatgctccgc
ggcgacctcgcgccggtcgcccacgccgcgctcaccgagggaccgaacgccctggatcgc
tttacgctcgaggtcggccgtcccgtccgcccgatgctcgccagacccgccaaggacgtc
gacgacgcgttcggcaagctcaaggacgcccccgccgccgccgaggccaagctcgacggc
gcgcgcatccaggtgcaccgcagcggcagcgacgtggcggtcttcacgaggagcctggac
gacgtgaccgcccgcgtgccggagatcgtcgtcgccgcccgggcgctgccggtcgccgac
gtcgtcctcgacggcgaggcgatcgcgctcaagcccggcggccgcccccagccgttccag
gtcaccgcctcgaggttcgccacctcgagcaagacccccgcgatcgccctgacgccgttc
ctcttcgacgtcctgcgcctcgacggcaacgacacgatcgacctcccgggccgggaacgc
gccgcgctcctcgccgagctggtcccgcacaaccagcgcacgccccgcgagcccgtcacg
acgacccggcaggcccgggacttcctcgcccgcaccctcgacgccggccacgagggcatc
atgctcaaggccctcgatgccccgtacgccgccggcagccgcggcgccggctggctgaag
gtcaagccggtccacacgctcgacctcgtcgtcctcgccgccgaatggggccacggccgc
cgccggggctggctcagcaacctccacctcggcgcgcgcgaccccggcgactccacggcg
acgagcttcgtcatgctcggcaagaccttcaagggcctcaccgacgagatgctcgcctgg
cagacccggcgcctgctcgagctcgagacggcccgcacgcgctacgccgtgcaggtccgt
cccgagctcgtcgtcgagatcgcgttcgacggcatccagaccagcccgcgctaccccggc
ggggtggcgctgcgcttcgcccgcgtgatccgccaccgcccggacaagccggcggcggag
gcggacacgctcgacgcggtgctgtccgtcgccggctga
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