Sphingobacterium bambusae: SCB77_22995
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Entry
SCB77_22995 CDS
T09645
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sbam
Sphingobacterium bambusae
Pathway
sbam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sbam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SCB77_22995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbam03021
]
SCB77_22995
Transcription machinery [BR:
sbam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SCB77_22995
BRITE hierarchy
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_40
HTH_Tnp_ISL3
HTH_30
HTH_11
HTH_10
HTH_28
NUMOD1
HTH_7
HTH_5
HTH_29
HTH_20
HTH_23
DUF134
HTH_24
DUF1492
HTH_AsnC-type
HTH_36
HTH_22
Motif
Other DBs
NCBI-ProteinID:
WPL48823
LinkDB
All DBs
Position
5530547..5531158
Genome browser
AA seq
203 aa
AA seq
DB search
MRRIISPNERSIDLQNLSLLQASESEANLFLNQLFEKYWKALYQFSFNLLQDGDEAQDTV
QELFINLWDRRHHIDIQTSLEAYLFSSVRYKSLTKLQAKLSNAKRDIPLESLVVESFQEA
VDPSLLKELQEEIALQISKLPARMQQVIRMRTMDCMSISEIAKNLHISEDTVKNHLAAAR
KKLRIQLGDAAYLLLLGSVGYLQ
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgagacgcataatttccccaaatgaacgtagcattgacctccagaacttgtccctatta
caagccagtgaatccgaggccaatcttttcttaaatcaactgttcgaaaaatattggaaa
gcactgtatcagttttccttcaatctactgcaggacggcgatgaagcgcaagacactgta
caggaactatttataaacctttgggatcgccggcatcatattgatatacagacctcattg
gaggcctatctgttcagttcggtgcgttataaatcgttaacgaagctgcaagccaagtta
agcaacgccaaaagagatattccgttagaaagcttagttgtggaaagttttcaagaggcg
gtagaccccagtctgttaaaagaacttcaagaagaaatagcactacaaatcagcaaacta
cctgcgcgtatgcaacaagtgatccggatgcgtactatggactgcatgagcatttcggaa
atagcgaaaaatcttcatatttccgaggataccgtcaaaaaccatttggccgctgcacga
aagaaactccgtatacagcttggtgacgccgcctatctattgctgctcggcagcgtgggt
tacctgcaatag
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