Shewanella baltica BA175: Sbal175_1132
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Entry
Sbal175_1132 CDS
T02014
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbb
Shewanella baltica BA175
Pathway
sbb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Sbal175_1132
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbb03019
]
Sbal175_1132
03016 Transfer RNA biogenesis [BR:
sbb03016
]
Sbal175_1132
Enzymes [BR:
sbb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Sbal175_1132
Messenger RNA biogenesis [BR:
sbb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Sbal175_1132
Transfer RNA biogenesis [BR:
sbb03016
]
Prokaryotic type
tRNA degradation factors
Sbal175_1132
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AEG10409
UniProt:
G0B0K6
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All DBs
Position
1344984..1347086
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AA seq
700 aa
AA seq
DB search
MNPIVKSFEYGQHTVTLETGVIARQADAAVLASMGDTTVLVTVVGKKEADAGRDFFPLTV
NYQEKTYAAGKIPGGFFKREGRPSEDETLIARLIDRPIRPLFPNGFKNEVQVIITVVSVD
PQIEPDIISMIGTSAALAISGIPFSGPLGAARVGYIDGEYVLNPSVAQLATSQLNLVVAG
TAGAVLMVESEAQALPEEVMLGSVVYGHDQQQVVIKAIAEFKAEAGKPTWDWTAPTQDAD
LVAQIKELAEAGLGDAYKIQVKQDRYAQVSVVKAATKEALLASNPSIDLREVDNLLGSLE
KKVVRGRIIRGEPRIDGREPDMIRALSVLAGVLPRTHGSALFTRGETQALVTCTLGTERD
AQKIDSIMGERTNRFMLHYNFPPYSVGETGMVGSPKRREIGHGKLAWRGINAVMPSAAEF
PYSVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKTSVAGIAMGLVKEGDDFVVLSDI
LGDEDHLGDMDFKVAGTRDGITALQMDIKIEGITKEIMDIALQQAYGARVHILNVMDQAI
GSHRDDISDHAPRITVIKINPEKIRDVIGKGGAVIRALTEETGTTIELEDDGTVKIASSN
GEATKEAIRRIEEITSEVEVGRIYNGKVIRIVDFGAFVNILPGKDGLVHISQISDERVAN
VSDHLELNQEVAVKVMEVDRQGRVRLSIKEAQTKETAAAE
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagagttttgagtatggtcaacatacagtcaccctggaaacaggt
gttatagcgcgtcaagcagatgcagccgttttagcgagtatgggtgacacgactgtgttg
gtcactgttgtcggtaaaaaagaagcagatgcaggtcgtgactttttccctctgactgtt
aactatcaagaaaaaacctacgcagcgggtaaaattcctggtggtttctttaagcgtgaa
ggccgtccttcagaagatgagacattaatcgctcgtctgatcgaccgtccaattcgccct
cttttccctaatggtttcaaaaacgaagttcaagttatcattactgtagtatctgtcgat
ccacaaatcgagccagatatcatctctatgattggtacttctgcggcactggctatttct
ggtattccattcagcggtcctttaggggctgcacgtgtgggttacattgatggcgaatac
gtgttgaacccaagtgttgcgcaacttgcaaccagccaactgaacttagtggttgctggt
actgctggtgcagtattaatggtggaatcagaagcccaagcattgccagaagaagtgatg
ttaggttctgttgtttacggtcacgatcaacaacaagtggttatcaaagcgattgctgaa
tttaaagcagaagccggtaaaccaacttgggattggactgcaccaacgcaagatgccgat
ttagttgcccaaatcaaagagcttgctgaagctggtttaggcgatgcgtataaaatccaa
gttaaacaagatcgttatgctcaagtttctgttgttaaagcagcaacaaaagaagccttg
ttagccagcaatccaagcattgatttacgtgaagtagacaacttgctgggtagcttagag
aagaaagtggttcgtggtcgcatcatccgtggtgagccacgtatcgatggtcgtgaacca
gacatgatccgtgcattaagcgtgttagcgggcgtattgccacgtactcacggtagcgca
ttgttcactcgtggcgaaactcaagcgttagtcacttgtactttaggtactgaacgtgat
gcacagaagattgacagcatcatgggcgagcgcactaaccgtttcatgctgcactataac
ttccctccatactctgttggtgaaacaggcatggtgggttcacctaagcgccgcgaaatc
ggtcatggtaagttagcatggcgcggtatcaatgctgttatgccttcagctgctgaattc
ccatacagcgtgcgcgttgtatctgaaatcactgaatctaacggttcaagctctatggcg
tcagtatgtggtacttcattagctctgatggatgctggtgtgcctatcaaaacttctgta
gcgggtatcgctatgggtctagtgaaagaaggcgatgattttgttgttctttctgacatc
ttaggtgatgaagatcatttaggtgacatggactttaaagttgcgggtacgcgtgatggt
attactgcactgcagatggatatcaagatcgaaggtatcactaaagaaatcatggatatc
gcactgcaacaagcctatggcgcacgtgtacatatcctgaacgtgatggatcaagcgatt
ggttcacaccgtgatgatatttctgatcacgctccacgtatcactgttatcaagattaac
ccagaaaaaattcgtgacgttatcggtaaaggcggcgcagttatccgtgctcttactgaa
gaaaccggcactacgattgaactggaagacgatggtacagtgaagatcgcttcttcaaac
ggcgaagcaaccaaagaagctatccgtcgtatcgaagaaatcacttcagaagttgaagtg
ggtcgtatctacaacggtaaagttatccgtatcgttgatttcggtgcgttcgtgaacatt
ctgccgggcaaagacggtttagtacacatttcacaaatcagtgatgagcgtgttgctaac
gtgtctgatcaccttgaactgaaccaagaagttgctgttaaagtaatggaagtggatcgt
caaggccgcgtacgtctgtcaattaaagaagcacaaactaaagaaactgccgctgctgaa
taa
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