Salmonella bongori NCTC 12419: SBG_0687
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Entry
SBG_0687 CDS
T01579
Symbol
uvrB
Name
(GenBank) excision nuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBG_0687 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_0687 (uvrB)
DNA repair and recombination proteins [BR:
sbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBG_0687 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SBG_0687 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
IF2_N
SBDS_domain_II
AAA_22
DUF4686
Motif
Other DBs
NCBI-ProteinID:
CCC29779
UniProt:
A0A0K0H8V4
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All DBs
Position
776900..778921
Genome browser
AA seq
673 aa
AA seq
DB search
MSKPFKLNSAFKPSGDQPEAIRRLEEGLEDGLAHQTLLGVTGSGKTFTIANVIADLQRPT
MVLAPNKTLAAQLYGEMKAFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTVGMLIDQRAILRRLAELQ
YTRNDQAFQRGTFRVRGEVIDIFPAESDDIALRVELFDEEVERLSLFDPLTGQVESTVPR
YTIYPKTHYVTPRERILQAMEEIKDELADRRKVLLANNKLLEEQRLSQRTQFDLEMMNEL
GYCSGIENYSRFLSGRGPGEPPPTLFDYLPADGLLVVDESHVTIPQIGGMYRGDRARKET
LVEYGFRLPSALDNRPLKFEEFEALAPQTIYVSATPGNYELEKSGGDVVDQVVRPTGLLD
PIIEVRPVATQVDDLLSEIRQRAAINERVLVTTLTKRMAEDLTEYLEEHGERVRYLHSDI
DTVERMEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNVNGKAILYGDKITPSMAKAIGETERRREKQQKYNEEHGITPQGLNKKVIDVLALG
QNIAKTKAKGKGKGRVTAKSGIVELDMTPKALQQKIHELEGQMMQHAQNLEFEEAAQIRD
QLHQLRELFIAAS
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaccgttcaaactgaattccgcttttaaaccttctggcgatcagccggaggct
atacgccgtctggaagagggcctggaggatggcctggcgcatcagacgttgttgggcgta
accggctccgggaagacattcaccattgccaacgtcattgccgacttgcagcggccgacg
atggtactggcgcctaataaaacgctggcggcgcagctttatggcgaaatgaaagcgttt
ttcccggaaaatgcggtggagtattttgtctcttactacgattactatcagccggaagcg
tatgtgccgagttcggatacgtttatcgaaaaagatgcgtcggtgaacgaacatattgag
caaatgcggctgtcggccacgaaagcactgcttgagcgacgcgatgtcgtggtggtggct
tctgtgtccgctatctacgggctgggtgatcctgatctctatctgaaaatgatgctacat
ctgacggtaggaatgctgatcgaccagcgcgcgattctgcgtcggctggccgaactgcaa
tatacccgaaacgaccaggcgttccagcgcgggacgttccgcgtgcgcggcgaagtgatc
gatatcttcccggcggaatctgatgatatcgcgctgcgcgttgagttgtttgatgaagag
gttgagcgcctgtcgctatttgacccgttaaccgggcaggtcgagtcaacagtgccacgt
tataccatctatcctaaaacgcactatgtgacgccacgcgagcgtattctccaggcgatg
gaagagataaaagatgagctggcggacaggcgtaaagtgctgctggcgaataataagctg
cttgaagaacagcggttaagccagcgcacgcagttcgatttagagatgatgaatgagctg
ggctactgctcgggtattgaaaactattctcgctttctgtctggccgcgggccgggcgag
ccgccgccaaccttgttcgattatctgcccgccgacggactgctggtggtggatgagtcc
cacgtgacgatcccgcagatcggcggcatgtatcgcggggaccgggcgcgtaaagagacg
ctggttgagtatggtttccgtctgccttcggcgctggataaccgtccactaaagtttgaa
gaatttgaagcgttagcgccgcaaaccatatatgtttccgctacgcccggcaactatgaa
ctggagaaatccggtggtgatgtcgtggaccaggtggtacggccaaccgggctgctggac
ccgattattgaagtgcgtccggtggcgacccaggtggacgatttactttctgaaatccgt
cagcgtgcggccattaacgagcgtgtgctggtgaccacgcttaccaagcggatggcggaa
gacctgactgaatatctggaagagcacggcgagcgcgtgcgttatctgcactcggatatt
gataccgtggaacgcatggaaatcatccgcgatttgcgtctgggggagtttgacgtgctg
gtgggaattaacctgttacgcgaagggctggatatgccggaagtctcgttggtggcgatt
ctggacgccgataaagagggctttctgcgctctgagcgttccttgattcagaccattggc
cgcgcggcgcgtaacgtcaatggtaaagcgattctttacggcgataagatcacgccgtcg
atggcgaaagcgattggcgaaactgaacgtcgtcgcgagaagcagcagaagtacaacgaa
gaacacggcatcactccgcaggggctgaacaaaaaagtgatcgatgtactggcgctgggg
cagaacattgcgaaaaccaaagcgaaggggaaaggaaaaggccgcgttacggcgaaatcc
gggattgttgaactggatatgacgccaaaagcattgcagcagaaaattcatgagctggag
gggcaaatgatgcagcacgcgcagaatctggagtttgaagaggccgcgcaaattcgcgac
cagctgcatcaactacgcgagctgtttatcgccgcctcctga
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