KEGG   Salmonella bongori NCTC 12419: SBG_3699
Entry
SBG_3699          CDS       T01579                                 
Symbol
uvrA
Name
(GenBank) excision nuclease subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
sbg  Salmonella bongori NCTC 12419
Pathway
sbg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    SBG_3699 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbg03400]
    SBG_3699 (uvrA)
DNA repair and recombination proteins [BR:sbg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     SBG_3699 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      SBG_3699 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_16 AAA_29 nSTAND1 RsgA_GTPase DnaJ_CXXCXGXG AAA_23 AAA_25 NACHT Viral_helicase1 cobW ExoX-like_C ScfRs
Other DBs
NCBI-ProteinID: CCC32743
UniProt: A0A0K0HH63
LinkDB
Position
complement(4101010..4103835)
AA seq 941 aa
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSASVHKVVLYGSGKENIEFNY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH
VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK
NT seq 2826 nt   +upstreamnt  +downstreamnt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaatattaacctcgtt
atcccacgcgacaaactgattgttgtgaccgggctttcgggttcaggcaaatcctcactg
gctttcgacactctgtatgccgaagggcagcgtcgttacgttgaatcgctctccgcttac
gcgcggcagtttttgtcgctcatggaaaaaccagatgttgaccatattgaggggctatcg
cccgcgatctcaattgaacagaaatcaacgtcccataacccacgctctacggttggcacc
attaccgagattcacgactatctgcgtctgctgtttgcccgcgtgggcgagccgcgttgc
ccggaccatgacgtgccgttggcggcgcaaaccgttagccagatggtcgataacgtgctg
tcgcagccggaaggcaaacgcctgatgctgttggcgccaattattaaagagcgtaaaggc
gagcacaccaaaactctggaaaacctggcaagccagggctacattcgcgcccgtatcgac
ggtgaagtgtgcgatctctccgatccgccaaagctggagctgcaaaagaaacataccatt
gaggtggtgatcgatcgcttcaaagttcgcaacgatctttcccaacgcctggcggagtcg
ttcgaaacggcgctggaattatccggcggcacggcggttgttgccgatatggacgatgag
aaagcggaggagcttctgttctccgccaattttgcctgcccgatttgcggctacagtatg
cgcgaactggaaccgcgtctgttctcgttcaataacccggcaggcgcctgcccaacctgt
gatggcctcggcgtacagcaatatttcgatccggaccgtgtgatccagaatcccgacctg
tcgctggcaggcggcgcaattcgcggttgggatcgtcgcaatttttactattttcagatg
ctcaaatcactggcggaacattataagttcgacgtggatgcaccgtgggcaagccttagc
gccagcgtacataaagtcgtactgtacggctccggtaaagagaacatcgaatttaactat
atgaacgaccgcggcgatacctccgtgcgtcgtcacccgttcgaaggcgtgctgcataat
atggagcgccgttataaagaaacagaatccagcgcggtgcgtgaagaactggcgaaattt
atcagtaaccgcccttgcgccagctgtgaaggaacgcgactgaatcgcgaagcccgccac
gtcttcgtggaaaatacgccgttgcccgctatttccgatatgagcatcgggcacgcgatg
gattttttcactaatctcaagctttccgggcaacgggcgaaaatcgccgaaaaagtgtta
aaagagattggcgatcgtcttaagtttctggtgaatgtcggcctgaactacctcaccctc
tctcgctcggcagagacgctttctggcggcgaagcccagcgtattcgcctggcaagccaa
attggcgccgggttagtcggcgtgatgtacgtactggacgaaccgtccatcggcctgcat
cagcgagacaatgagcggctactgggtacgctgattcatctgcgtaatctcggtaatacc
gtcattgtggtggaacatgatgaagatgctatccgcgccgccgaccatgtgattgatatt
ggccccggcgcaggcgttcacggtggcgaagtcgttgcagaagggccgctggaagccatt
atggcggtgccggaatcgttgacaggccagtacatgagcggtaagcgcaaaattgaagtc
ccgaaacaacgcgtgccggcaaatccggaaaaagtgctcaaactgactggcgcgcgcggt
aacaacctgaaagatgtgacgctgacattaccggtagggctgtttacctgtattaccggc
gtctccggctccggtaaatcaacgctgattaacgatactctgttccccatcgctcagcgc
cagttgaacggggcgactatcgctgaacccgcgccgtatcgggatattcaggggctggaa
catttcgacaaagtgatcgatatcgaccaaagcccgattggccgtactccacgctcgaac
ccggcgacgtataccggcgtgttcaccccggtgcgcgaactgttcgcgggcgtaccggaa
tcacgttcacgcggttatacgccaggacgcttcagcttcaacgtgcgcggcggtcgctgc
gaagcgtgccagggcgatggcgtcattaaagtcgaaatgcattttttgccggatatttac
gtcccttgcgaccagtgcaaaggcaaacgctacaaccgggaaacgctggagattaaatac
aaaggcaagaccatccatgaagtgctggatatgaccattgaagaggcgcgggagttcttt
gatgcggttccggcgctggcgcgtaagctgcaaacgctaatggatgtgggcctgacctat
atccgcctgggacaatctgccactacgctttccggcggcgaggcccagcgcgtgaagctg
gcgcgcgaactgtcgaaacgcggcaccggacaaacgctgtatattcttgatgagccgacc
accggtctgcattttgccgatattcagcagttgcttgatgttctgcaccagttgcgcgat
cagggcaacaccatcgtggtaatcgaacacaatctggacgttattaaaacggcagactgg
attgtcgacctcggcccggaaggcggtagcggcggcggcgaaattctcgtctccggtacg
ccggaaaccgtggcggaatgtgaagcatcgcataccgcccgcttccttaaaccgatgctc
aaataa

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