Salmonella bongori NCTC 12419: SBG_3699
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Entry
SBG_3699 CDS
T01579
Symbol
uvrA
Name
(GenBank) excision nuclease subunit A
KO
K03701
excinuclease ABC subunit A
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SBG_3699 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_3699 (uvrA)
DNA repair and recombination proteins [BR:
sbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SBG_3699 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
SBG_3699 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
NACHT
Viral_helicase1
cobW
ExoX-like_C
ScfRs
Motif
Other DBs
NCBI-ProteinID:
CCC32743
UniProt:
A0A0K0HH63
LinkDB
All DBs
Position
complement(4101010..4103835)
Genome browser
AA seq
941 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLFARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVIDRFKVRNDLSQRLAESFETALELSGGTAVVADMDDE
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPDL
SLAGGAIRGWDRRNFYYFQMLKSLAEHYKFDVDAPWASLSASVHKVVLYGSGKENIEFNY
MNDRGDTSVRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLNREARH
VFVENTPLPAISDMSIGHAMDFFTNLKLSGQRAKIAEKVLKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRNLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKQRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRSRGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHQLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPMLK
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaatattaacctcgtt
atcccacgcgacaaactgattgttgtgaccgggctttcgggttcaggcaaatcctcactg
gctttcgacactctgtatgccgaagggcagcgtcgttacgttgaatcgctctccgcttac
gcgcggcagtttttgtcgctcatggaaaaaccagatgttgaccatattgaggggctatcg
cccgcgatctcaattgaacagaaatcaacgtcccataacccacgctctacggttggcacc
attaccgagattcacgactatctgcgtctgctgtttgcccgcgtgggcgagccgcgttgc
ccggaccatgacgtgccgttggcggcgcaaaccgttagccagatggtcgataacgtgctg
tcgcagccggaaggcaaacgcctgatgctgttggcgccaattattaaagagcgtaaaggc
gagcacaccaaaactctggaaaacctggcaagccagggctacattcgcgcccgtatcgac
ggtgaagtgtgcgatctctccgatccgccaaagctggagctgcaaaagaaacataccatt
gaggtggtgatcgatcgcttcaaagttcgcaacgatctttcccaacgcctggcggagtcg
ttcgaaacggcgctggaattatccggcggcacggcggttgttgccgatatggacgatgag
aaagcggaggagcttctgttctccgccaattttgcctgcccgatttgcggctacagtatg
cgcgaactggaaccgcgtctgttctcgttcaataacccggcaggcgcctgcccaacctgt
gatggcctcggcgtacagcaatatttcgatccggaccgtgtgatccagaatcccgacctg
tcgctggcaggcggcgcaattcgcggttgggatcgtcgcaatttttactattttcagatg
ctcaaatcactggcggaacattataagttcgacgtggatgcaccgtgggcaagccttagc
gccagcgtacataaagtcgtactgtacggctccggtaaagagaacatcgaatttaactat
atgaacgaccgcggcgatacctccgtgcgtcgtcacccgttcgaaggcgtgctgcataat
atggagcgccgttataaagaaacagaatccagcgcggtgcgtgaagaactggcgaaattt
atcagtaaccgcccttgcgccagctgtgaaggaacgcgactgaatcgcgaagcccgccac
gtcttcgtggaaaatacgccgttgcccgctatttccgatatgagcatcgggcacgcgatg
gattttttcactaatctcaagctttccgggcaacgggcgaaaatcgccgaaaaagtgtta
aaagagattggcgatcgtcttaagtttctggtgaatgtcggcctgaactacctcaccctc
tctcgctcggcagagacgctttctggcggcgaagcccagcgtattcgcctggcaagccaa
attggcgccgggttagtcggcgtgatgtacgtactggacgaaccgtccatcggcctgcat
cagcgagacaatgagcggctactgggtacgctgattcatctgcgtaatctcggtaatacc
gtcattgtggtggaacatgatgaagatgctatccgcgccgccgaccatgtgattgatatt
ggccccggcgcaggcgttcacggtggcgaagtcgttgcagaagggccgctggaagccatt
atggcggtgccggaatcgttgacaggccagtacatgagcggtaagcgcaaaattgaagtc
ccgaaacaacgcgtgccggcaaatccggaaaaagtgctcaaactgactggcgcgcgcggt
aacaacctgaaagatgtgacgctgacattaccggtagggctgtttacctgtattaccggc
gtctccggctccggtaaatcaacgctgattaacgatactctgttccccatcgctcagcgc
cagttgaacggggcgactatcgctgaacccgcgccgtatcgggatattcaggggctggaa
catttcgacaaagtgatcgatatcgaccaaagcccgattggccgtactccacgctcgaac
ccggcgacgtataccggcgtgttcaccccggtgcgcgaactgttcgcgggcgtaccggaa
tcacgttcacgcggttatacgccaggacgcttcagcttcaacgtgcgcggcggtcgctgc
gaagcgtgccagggcgatggcgtcattaaagtcgaaatgcattttttgccggatatttac
gtcccttgcgaccagtgcaaaggcaaacgctacaaccgggaaacgctggagattaaatac
aaaggcaagaccatccatgaagtgctggatatgaccattgaagaggcgcgggagttcttt
gatgcggttccggcgctggcgcgtaagctgcaaacgctaatggatgtgggcctgacctat
atccgcctgggacaatctgccactacgctttccggcggcgaggcccagcgcgtgaagctg
gcgcgcgaactgtcgaaacgcggcaccggacaaacgctgtatattcttgatgagccgacc
accggtctgcattttgccgatattcagcagttgcttgatgttctgcaccagttgcgcgat
cagggcaacaccatcgtggtaatcgaacacaatctggacgttattaaaacggcagactgg
attgtcgacctcggcccggaaggcggtagcggcggcggcgaaattctcgtctccggtacg
ccggaaaccgtggcggaatgtgaagcatcgcataccgcccgcttccttaaaccgatgctc
aaataa
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