Sorghum bicolor (sorghum): 110434951
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Entry
110434951 CDS
T01086
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 2-like
KO
K05610
ubiquitin carboxyl-terminal hydrolase L5 [EC:
3.4.19.12
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
110434951
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbi01002
]
110434951
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
110434951
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
110434951
Peptidases and inhibitors [BR:
sbi01002
]
Cysteine peptidases
Family C12: ubiquitin C-terminal hydrolase family
110434951
Ubiquitin system [BR:
sbi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UCH
110434951
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C12
UCH_C
SHPRH_helical-1st
Trehalose_PPase
DUF3086
Integrase_DNA
Cas_DxTHG
FlgN
Motif
Other DBs
NCBI-GeneID:
110434951
NCBI-ProteinID:
XP_021315705
LinkDB
All DBs
Position
4:67882302..67885386
Genome browser
AA seq
328 aa
AA seq
DB search
MSWCTIESDPGVFTELIQQMQVKGVQVEELYSLDVDSLSQLRPVYGLIFLFKWIPGEKDE
RLVVRDPNPNLFFAHQVITNACATQAILSVLMNRPEIDIGPELSQLKEFTGAFTPDLKGL
AISNSESIRTAHNSFARPEPFISDEQRAATKDDDVYHFISYLPFEGVLYELDGLKEGPVN
LGQCGGADDLDWLRMVQPVIQERIERYSQSEIRFNLMAIIKNRKEVYSAELEELEKRREQ
ILQEMNKTAATESLNNSLTEVISAIETVREKMVMEEEKFKKWKTENIRRKHNYIPFLFNL
LKMLAEKQQLKPLVEKAKQQKSSSPSTR
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgtcctggtgcactattgagtctgatcctggtgtgttcaccgagctgattcagcaaatg
caagtgaaaggtgtacaggtggaagagctttattctcttgatgtggattctcttagtcaa
ctgcggccagtatatgggctaatttttctcttcaagtggatacctggggagaaggatgaa
cggcttgttgtcagagatcctaatccaaaccttttctttgcacaccaagtcatcactaac
gcatgtgctactcaagctattctctcagttctcatgaatcgccctgaaattgacatcggt
ccagaattatctcaattgaaggaattcacaggagctttcacacctgatctgaagggctta
gctatcagcaacagcgaatccatccggacagctcataacagctttgcaaggccagagcca
tttatttctgatgagcagagagccgcgactaaggatgatgatgtttaccatttcataagc
tatttaccttttgaaggtgtcctgtatgagctggatgggctgaaggaagggcctgtaaat
cttgggcagtgcggtggtgctgatgaccttgattggctacggatggtgcagccagttatt
caagaaaggattgagcgctactcacagagtgagatcaggttcaatcttatggccatcata
aagaacaggaaagaggtgtacagtgctgagctggaggagctggagaagagaagggagcag
attttgcaggagatgaacaagactgccgccacagaatccttgaacaactcgcttacagag
gtgatatcggcaatcgaaaccgtcagagagaagatggtcatggaagaagagaagttcaag
aagtggaagacggagaacattcggaggaagcataactacatccctttcctcttcaacttg
ctgaagatgcttgcagagaagcagcaactaaaacctctggtcgagaaagccaaacagcaa
aagtcatcaagccctagcacaagatga
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integrated database retrieval system
