Sorghum bicolor (sorghum): 110437016
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Entry
110437016 CDS
T01086
Name
(RefSeq) glutamate decarboxylase-like isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00250
Alanine, aspartate and glutamate metabolism
sbi00410
beta-Alanine metabolism
sbi00430
Taurine and hypotaurine metabolism
sbi00650
Butanoate metabolism
sbi01100
Metabolic pathways
sbi01110
Biosynthesis of secondary metabolites
Module
sbi_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
110437016
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
110437016
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
110437016
00430 Taurine and hypotaurine metabolism
110437016
Enzymes [BR:
sbi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
110437016
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Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
110437016
NCBI-ProteinID:
XP_021320669
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All DBs
Position
7:complement(58528824..58534273)
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AA seq
503 aa
AA seq
DB search
MVVSVAATGPGTDAEPVSSTTFASRYVRDPLPRYRMPERSIPREAAYQIISDELMLDGNP
RLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIKEEE
TAIGVGTVGSSEAIMLAGLAFKRKWQNKRKEQGKPCDKPNIVTGANVQVCWEKFARYFEV
ELKEVKLSEGYYVMDPVKAVEMVDENTICVAAILGSTLTGEFEDVKLLNDLLTKKNKETG
WDVPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGVGWVIWRSKEDL
PEELIFHINYLGTDQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYKNIMENCQENAAILRE
GIAATGRFDVLSKDTGVPLVAFSLKDSSRFSVFDISENLRRFSWIVPAYTMPADAEHVAV
LRVVIREDFSRSLCERLVSDIKKILHELDARATHAVTWVSTAAAAAVQADDGAVVGKKSA
LEIEREVAARWRNAVNKKKTGVC
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atggtggttagcgtggccgcgacggggcccggcacggacgccgagccggtgagctccacc
accttcgcgtcccgctacgtccgcgacccactcccacggtaccggatgccggagcggtcg
atcccgcgggaggcggcgtaccagatcatcagcgacgagctgatgctggacggcaacccg
aggctgaacctggcgtccttcgtcaccacgtggatggagcccgagtgcgacaagctcatc
atggactccgtcaacaagaactacgtcgacatggacgagtaccccgtcaccaccgagctc
cagaaccgctgtgtaaatatgatagctcacttgttcaatgcaccgattaaggaggaggag
acggctattggagtcggaacagtggggtcctcagaagcaatcatgcttgcaggtctagca
ttcaagaggaaatggcaaaacaagaggaaggaacaggggaaaccatgtgacaaacccaac
attgtcactggtgctaatgttcaggtttgctgggagaaatttgcaaggtattttgaagta
gaactgaaggaggttaagttatcagaaggatattatgtcatggaccctgtcaaggctgtt
gagatggtggacgagaacactatttgtgttgcggcaatcttgggatcaactctcactgga
gagtttgaagatgtcaaactattgaacgaccttcttacaaaaaagaacaaggaaactgga
tgggatgtgcctattcatgtcgatgctgcgagtggaggattcatagcacctttcctctac
cctgaacttgagtgggacttcaggctacctttggtgaagagcatcaatgtcagtgggcac
aagtatggccttgtctatgctggtgttggctgggtcatctggcggagcaaggaggatttg
cctgaagagctcattttccatataaactacctagggacagatcagcctacattcactctc
aacttctccaaaggttccagtcagatcatcgcacaatactatcagctcattcgcctaggc
ttcgagggatacaaaaacatcatggagaactgccaggagaacgcggcgatactgcgggaa
ggcatcgcagcgacggggcggttcgacgtcctgtccaaggacacgggcgtgccgctggtg
gccttctcgctcaaggacagcagccggttcagcgtgttcgacatctccgagaacctgcgg
cggttcagctggatcgtgccggcgtacacgatgccggcggacgcggagcacgtggcggtg
ctccgcgtggtcatcagggaggacttcagccggagcctctgcgagcggctcgtctcggac
atcaagaagatcctgcacgagctggacgcgcgcgccacccacgccgtgacctgggtctcc
accgccgccgccgccgctgtgcaggcggacgacggcgccgtcgtgggaaagaagagcgcg
ctggagatcgagcgggaggtcgccgcgaggtggaggaacgctgtgaacaagaagaagacg
ggggtctgttga
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