Sorghum bicolor (sorghum): 8054712
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Entry
8054712 CDS
T01086
Name
(RefSeq) sphingosine kinase 2 isoform X1
KO
K04718
sphingosine kinase [EC:
2.7.1.91
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00600
Sphingolipid metabolism
sbi01100
Metabolic pathways
sbi04148
Efferocytosis
Module
sbi_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
8054712
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
8054712
Enzymes [BR:
sbi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.91 sphingosine kinase
8054712
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GFIT
Motif
Pfam:
DAGK_cat
YegS_C
CERK_C
DUF596
Motif
Other DBs
NCBI-GeneID:
8054712
NCBI-ProteinID:
XP_021311061
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All DBs
Position
3:complement(64507814..64512437)
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AA seq
491 aa
AA seq
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MEDDRATANVRVDGAPAEATLSGGELRWRRGGAGGAGPERALSLESDVLGVQVTGKEVVV
RAFVAAGAARALSCAGAGGKRCRRDFVLQMADGEGAAVAWGEGLTRYLDSFGRPKRLFVF
VNPFGGKKCARKIYDTEIKPLFEAAGVSITLQETEYQGHAREVVYSLDLAEYDGVVCVSG
DGVLVEVVNGILQRTDWEEAIKVPIGVVPAGSGNGMAKSLLHAASEKYSVSNAVFAIIKG
HKQSLDVCTILQGDTKFFSVLLMTWGLVADIDIESEKYRWMGSARFDFYALVRIMNLRKY
CGSIQFVPAPGYEAYGEPIKQVKNSIVESVEQNGKSHRSSYPGPSVEFQASDWRFIDGPF
IAVWVNNVPWAAEDIMAAPEAKFSDGYMDAAILRDCPKADLLALLMKMSDGSYVKSPYVA
YLKVRTFQLSPGQLVENPKRGGIIDVDGEVIARGKGTYDKNQHQDVMAYGQPIQLTVHQA
LATIYCPDKIH
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaccgcgccacggccaatgtccgcgtggacggcgcgccggcggaagccacg
ctcagcggcggggagctgcggtggcgccgcggcggtgctggcggggccgggccggagcgg
gcgctgtcgctggagagcgacgtgctcggggtccaggtgacggggaaggaggtcgtcgtc
agggccttcgtggcggcgggcgcggcgagggcgctgtcgtgcgcgggcgcgggagggaag
cggtgcagaagggacttcgtgctccagatggcggacggcgagggcgccgccgtggcctgg
ggagaggggctcacacgctacctcgactccttcggccgccccaagagattgttcgtcttc
gtcaaccccttcggcggcaagaaatgcgccaggaagatctacgacacggaaatcaagcct
ctgtttgaagctgcgggtgtgagcatcacactgcaagagaccgagtaccaggggcatgcc
cgggaggtggtgtattccctcgacctcgcggagtacgacggcgtcgtctgcgttagcggt
gatggcgtcctcgtggaggtagtgaacggaattcttcaacggacagattgggaggaggca
ataaaagtgcctatcggtgtagttccagcaggttcaggaaatggcatggctaaatcactt
ctgcatgctgccagtgagaaatactcggtttcaaatgctgtatttgccataatcaaaggt
cacaagcagtccttagatgtctgtaccattttgcaaggggacacgaaattttttagtgtc
ttgctaatgacttggggtttggtggccgatatagatatcgagtctgagaaatacagatgg
atgggaagtgcacgcttcgacttctatgctctggtgcgcataatgaacttgcgaaaatac
tgtggaagtattcagttcgtgcctgccccaggctacgaggcatatggagaacccatcaag
caagtcaagaattccattgtagagtctgtggagcaaaatggaaaatctcatcggtcttct
tatccaggtccttcagttgagtttcaagcttcagattggagatttattgatggcccattt
attgcagtttgggtaaacaacgtgccatgggctgctgaggatatcatggcggctccagag
gcaaagttctcagatggctatatggatgcagccatactcagagattgtccaaaggctgat
cttttagctctattgatgaagatgagcgacggcagttatgtcaaatcaccatatgttgct
tacctcaaggtgagaacttttcaattatcaccaggccagcttgttgagaaccccaaaagg
ggtggcattatagatgtggacggagaggtaattgctagaggaaaaggaacttacgacaaa
aaccaacatcaagatgtgatggcttatggccaacctattcagctgacagtgcaccaagca
ttggctaccatatattgccctgacaaaattcactga
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