Sorghum bicolor (sorghum): 8054729
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Entry
8054729 CDS
T01086
Name
(RefSeq) pectinesterase
KO
K01051
pectinesterase [EC:
3.1.1.11
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00040
Pentose and glucuronate interconversions
sbi01100
Metabolic pathways
Module
sbi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
8054729
Enzymes [BR:
sbi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.1 Carboxylic-ester hydrolases
3.1.1.11 pectinesterase
8054729
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Motif
Pfam:
Pectinesterase
PMEI
ADNP_N
Motif
Other DBs
NCBI-GeneID:
8054729
NCBI-ProteinID:
XP_002456465
UniProt:
C5XMC1
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Position
3:64873514..64875984
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AA seq
552 aa
AA seq
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MLSSNEPLLSSPYQRNASPCRRPVLLITLSSAALLCAGAAFLLLNLPTPDLCASSPDPTS
CHAIVADAVLASPRAHLTRPGPAQVLRAIVARSLVQHDAAAAAVSGMLRHTGSDSDPRQR
AALADCVQLMDLARDRLADASPAVAAAAADDARTWLSAALTYYATCTDGVVVDGPLRDAV
VARLEPLKSLASASLAVLSAVVDDSGSRDAGLADTTYTFPSWVPARDRALLEAGAAIEAD
VVVAQDGSGKFRTVKEAVDAAPDGGKSRYVIYVKKGVYKENVEVGKKKRELMIVGDGMDA
TVITGSRNVVDGATTFNSATLAVAGDGIILQDLRVENTAGPAKHQAVALRVSADRAVAYR
CRVDGYQDTLYAHALRHLYRECFVSGTVDFVFGNAAAVLQGCALAARLPLRGQQNAVTAQ
GREDPNQNTGTSLHRCRVVPAPDLAPVAGTDFPTFLGRPWKAYSRTVVMLSYLDAHVDAR
GWLEWDGDFALKTLFYGEYQNEGPGAATAGRVNWPGYHVITDRSVAVQFTVGQFIQGGNW
LNGTGVPYIEGL
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcttagcagcaatgagcctctcctctcctcgccctaccaaagaaacgcttctccatgc
aggaggcccgtcttgctgatcacgctgtcatcggccgctctgctttgcgccggagcagcg
ttcctcctcctcaacctccccactccggacctctgcgccagctccccggacccaacctcg
tgccacgccatcgtggccgacgccgtgcttgcgtctccacgagcgcaccttacccgcccc
ggccccgctcaggtcctccgcgcgatcgttgccaggtctctcgtgcagcatgacgcggcc
gccgccgcggtgtccggcatgctccggcacaccggtagcgatagcgacccgaggcagcgc
gcggcgctcgcggactgcgtccagctcatggacctcgcgcgggaccgcctcgccgacgcc
tccccggccgtggccgcggccgcagcggacgacgcgcggacgtggctcagcgccgcgctc
acctactacgcgacgtgcacggacggcgtcgtcgtcgacgggccgctgcgcgacgccgtg
gtggcgcggctggaaccgctcaagtcccttgcgagcgcgtcgctcgccgtgctaagcgcc
gtcgtcgacgactcgggctcccgggacgccgggctcgccgacactacgtacacgttcccc
tcgtgggtgccggcgcgagaccgcgctctccttgaagcgggcgccgccatcgaggccgac
gtcgtggtggcccaggacgggagcggcaagttcaggacggtgaaagaggcggtagacgcg
gcgcccgacggcggcaagagcaggtacgtgatctacgtgaagaaaggggtgtacaaggag
aacgttgaggtggggaagaagaagcgcgagctgatgatcgtgggcgacggcatggatgcg
acggtgatcaccgggagccgcaacgtggtcgacggcgccacgactttcaactcggccacc
ctagccgtggcgggagacgggatcatcctgcaggacctgcgggtggagaacacggcgggg
ccagcgaagcaccaggcggtggcgctgcgcgtgagcgccgaccgcgccgtcgcctaccgc
tgccgcgtcgacgggtaccaggacaccctgtacgcgcacgcgctccgccacctgtaccgc
gagtgcttcgtgtccggcaccgtcgacttcgtcttcggcaacgcggccgccgtgctgcag
ggctgcgcgctggcggcgcgcctgcccctgcggggccagcagaacgcggtcaccgcgcag
ggccgggaggaccccaaccagaacacgggcacgtccctccacaggtgccgcgtcgtgccg
gcgcccgacctggcgcccgtggccgggacggacttcccgacgttcctgggccggccgtgg
aaggcctactcgcggacggtcgtcatgctgtcgtacctggacgcgcacgtcgacgccagg
gggtggctcgagtgggacggggacttcgcgctcaagacgctcttctacggggagtaccag
aacgaggggcccggcgccgccaccgccggccgggtcaactggcccggctaccacgtcatc
acggacaggagcgtggccgtgcagttcaccgtcggccagttcattcagggtggcaactgg
ctcaacggcaccggcgtgccctacatcgagggtctctga
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