Sorghum bicolor (sorghum): 8065033
Help
Entry
8065033 CDS
T01086
Name
(RefSeq) transcriptional elongation regulator MINIYO
KO
K20826
RNA polymerase II-associated protein 1
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbi03021
]
8065033
Transcription machinery [BR:
sbi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
8065033
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
8065033
NCBI-ProteinID:
XP_002438609
UniProt:
C5Z544
LinkDB
All DBs
Position
10:complement(51041203..51051697)
Genome browser
AA seq
1549 aa
AA seq
DB search
MDAPTKRRHQPGGAHPTRRKVVEEPFHPAPPTPAAAAAAAASASPARLVGAIVEKGFSAA
APSSAPRPSVLPFPVARHRSHGPHWGPVAKDAHKDGAADDDDEMDMDETDYHPVAAAAGP
VRRKEKKGMDFSRWREFVGDAPPKRRQGKPVQAKKQSDQRIDAGAVASMVGGVAATGRGL
EGGAMQLDSGELEGSAMQLDSGNTREGPGAVLSVSDVVSKKPMSQAESRDELVKVGEVRN
STSQAESMDLDGRESSMEAEINAENMARLAGMSAGEIAEAQTDIVNKLNPALVEKLRRRG
REKSGGTKDVGKDKGLENSGPQKTKRATPGDWLTPGEHSGHSWKAWSERVERIRSCRFTL
DGDILGFQFSHEQQDGKKMHSESVAERDFLRTEGDPAAVGYTIKEAVALTRSMVPGQRVL
ALQLLASILNRALQNLHKTDLMDNVKEMNSNEKFDDWQAIWSYALGPEPELVLSLRMALD
DNHDSVVLSCAKVINVMLSCEFNESYFEFSEKVGNGKDICTAPVFRSKPDLDGDFLEGGF
WKYNTKPSNILPHYGENDEDEGDDKHTIQDDVVVSGQDVAAGFVRMGILPRICFLLEMDP
SPALEDYLVSVLVALARHSPHSADAILNCPRLIQSVTKLLINQGSMEIRSSQIKGVTLLK
VLSKYNRQTCLNFVNHGVFQQALWHWYRKAGTIEDWVRSGKEKCKLSSAMMVEQLRFWRT
CISYGFCIAHFADFFPVLCLWLSPPEFKKLNEHNVLVEFSSIARESYLVLAALAQRLPLL
HSVEQLANQDRGVSASYIETCSWSHVVPMVDLALSWLHLNDIPYVCSLISGQNRNTKHMV
DASYLILVIASVLGMLNSILERISPNVTPEDKSYSLPWIPDFVPKIGLGIISNGFFSCLG
TVAVRNAEHQSFCSASLVQGLCYMRCHGNVDVSLSSISCLQRLVQLSWSVDRVIQGAKKS
CSECFNESGTGVAGKLLGEGISSLWHNDLLHLLTSLLPMISSQWSISQNIEMFGRGGPAP
GVGFGWGACGGGFWSLKCLLAQLDSQLVVELMKCFSSVQGSPVILDEGVKSDNVTNTVVT
ASNWISSSLGLSLIAGPGQIYMLEKAFDMIFEPSILKYLKSSIHKFASDMVLLKPFEWDI
NDDEYLLFSSVLNSHFRSRWLAVKKKKHSDKYTGNNSSTKISKTPETLETIQEETELTEA
VNQPCNTLVVEWAHQRLPLPIQWILSAVCCIDDPKGTLSTSANYILDVSRAGLIFLLGLE
AISATPCLHAPLIWKIHALSVSIRSSMHLLQEDRSRDIFCALQELYGQHLNRLCQKFCKS
KSVEEVKGVVVATSEEAMEISNHEILRFQEKIHGSYTTFVESLVDQFAAVSYGDFVFGRQ
VAIYLHRKVEPAVRLAAWNALSNAYVLELLPPLDKCIGNAQGYLEPLEDDENFLESYAKS
WTSGVLDKALQRDSMAFTLVKHHLSGFVFQSSDSGKTLRNKLVKSLIRCYAQKRHHEVML
KSFVLQGIAQDSKSSGNELDRRFEILKDACEMNSSLLGEVQRLRACLGQ
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgccgacgaagcggcggcaccagcccggcggcgcgcaccctacgcgccgtaag
gtcgtggaggagcccttccaccccgcaccccctacacctgccgcggcggcggcggcggcg
gcgtcggcgtccccggcccgcctcgtcggcgccatcgtcgagaagggcttctctgccgcc
gcgccctcctccgcgccccgcccttccgtcctccccttccccgtcgctcgccaccgctcc
cacggcccccactggggtcccgtggcgaaggacgcccacaaggatggggctgcggacgac
gacgacgagatggacatggacgagacagactaccatcctgtggcggctgctgctggtcct
gtgagaaggaaggagaagaagggcatggattttagccggtggcgtgagtttgttggcgat
gctccccccaagcggaggcaggggaagccggtgcaggccaagaaacagagcgatcagaga
attgatgctggggctgtggcttccatggtaggtggtgtggcagctacggggagaggattg
gagggaggtgctatgcagcttgatagtggagaattggagggaagtgctatgcagcttgac
agtggaaatactagggaaggaccaggtgctgtgctttcggtttctgatgtggtgtccaag
aagccgatgagtcaggctgaatcgagagatgaattggtgaaggtaggtgaggttaggaat
tcgacatcacaagcagagagtatggacctggatggcagggagtcatcaatggaagcagag
attaatgcagagaacatggctaggttggctgggatgtctgcaggggagattgcagaggcc
caaacagatattgtaaataagctgaaccctgcattggtggagaagctgaggcggcgggga
agggagaaatctggaggcacgaaggatgtgggtaaggacaagggtctggaaaactcaggg
ccacagaagaccaaaagggctacaccaggggattggttgactcccggtgaacatagtggg
cactcttggaaggcgtggagtgagagagtggagcggatcaggtcttgtaggttcacatta
gatggagacatattggggttccaattttctcacgagcaacaagatggcaagaagatgcat
tcagaaagtgttgctgagcgtgatttccttagaacagaaggagatcctgcagctgttggg
tacacaatcaaggaggcagtggcacttaccaggagcatggttccggggcagcgtgtgctt
gcactgcaacttcttgcttctattctgaatagggcattgcagaaccttcataagaccgat
ctaatggataatgttaaagaaatgaattctaatgaaaaattcgatgactggcaagcaatt
tggtcctatgccctagggcctgaaccagagttggtactctccctaaggatggctttggac
gataaccatgattctgtggttctgagttgtgctaaagtaattaatgtcatgctgagctgt
gagttcaatgaatcctattttgaattttcagagaaagtaggtaatggaaaagatatctgc
acagctcctgtgtttcgtagcaaacctgacctagatggagactttcttgaaggcgggttt
tggaagtacaacacaaaaccatcaaatatactcccacattatggtgagaatgatgaggac
gaaggtgatgacaagcatacaattcaggatgatgttgttgtgtctggccaagatgttgct
gctggttttgttaggatgggaatacttccacgaatctgttttctgttggagatggaccca
tctcctgctttagaagattatcttgtatcggttcttgtagcactagccaggcactcccca
cattctgctgatgcaatcttgaattgcccaagacttattcaaagtgttactaagctgttg
ataaatcaaggatcaatggaaattcgctcctcacaaatcaaaggggttactctcttgaag
gttttgtccaaatacaacagacaaacttgcttgaattttgtgaaccatggagtttttcag
caggcattgtggcactggtacagaaaagctggtactattgaggactgggtaagatctgga
aaggaaaaatgcaagcttagttcagcaatgatggttgagcagctgcggttttggcgaacc
tgcatctcttatgggttttgtatagctcactttgctgatttctttcctgttttgtgtctg
tggctcagtcctcctgaatttaagaaactaaatgaacacaatgttcttgttgagtttagt
tctattgctagagagtcatatcttgtcttagcagctctggcacaaaggttaccactcctt
cattcagtggagcagcttgccaatcaagatcggggagtttctgccagttatattgagaca
tgttcttggagccatgttgtcccaatggtagacttagcgttatcttggttacatctcaat
gatattccttatgtatgttcactaatcagcgggcagaataggaatacaaagcacatggta
gacgcaagctatttgattttggtgattgcttctgtcctaggcatgcttaattcaatcttg
gaaagaatatcaccaaatgtcactcctgaggataaaagttacagcttgccctggatacct
gattttgtccccaaaattggcctaggcataattagtaatggatttttcagctgcttgggc
actgttgctgttagaaatgcagagcatcagtctttttgtagcgcgtctttggtgcaggga
ctatgttatatgagatgccatggtaatgttgatgtatcattgtcttccataagctgcctt
caaagattggtgcagctatcctggtctgttgacagagtgatccagggagccaaaaaaagt
tgttctgagtgtttcaatgagtctggaacaggtgtagctggcaagctactaggagaaggt
atctccagtttatggcataatgatttgctacatttgttgacttcgctattgccaatgatt
tcatcacaatggtcaatatcacagaacatagagatgtttggtagaggaggaccagctcct
ggtgttgggtttggttggggggcatgtggtggagggttttggtctcttaaatgcctactt
gcacaattggattcacaattggttgtagaattgatgaaatgtttctcttcagttcaagga
agtcctgtcatccttgatgaaggtgtgaagtcagataatgtgactaacacagttgtgaca
gcttcaaattggatcagttcttccctagggttgtctttgattgccggacctggacaaatc
tatatgttggagaaagcttttgatatgatttttgagccttccattctgaagtatctcaaa
tcatctatacacaaatttgcctctgacatggtattactgaaaccttttgaatgggacata
aatgatgatgaatatctgctcttcagcagtgttctcaattcacatttcagatccagatgg
ttagccgtcaagaagaagaagcattcagataaatacacaggaaataatagcagcactaag
atttcaaaaacaccagagacattggagacaattcaagaagaaacagagttgacagaagct
gtaaatcaaccttgcaacacattagtggtagagtgggcgcaccagaggctgcctcttcct
atccaatggattctaagcgcagtttgctgcattgatgatccaaaaggcacgctctcaaca
tcagccaactatattcttgatgtctcaagggctggtcttatcttccttttaggtctggag
gccatttcagctaccccatgccttcatgctcctttgatctggaaaattcatgcactttcg
gtctctatccgctctagcatgcatttgctacaagaagacagaagtagggatattttctgt
gctttacaggaattgtatggccagcatctgaacaggttatgccagaaattctgtaaatcc
aaatctgttgaggaagttaagggtgttgtagtggccacttcagaggaagcaatggagatc
agtaaccacgaaattctcaggttccaggagaaaattcatggaagctatactacttttgtt
gagagcctagttgatcaatttgcagctgtctcatatggagattttgtttttggtcggcaa
gtggccatttatctacataggaaggttgagccagcagtacggcttgcagcatggaatgca
ctgtctaatgcgtatgtgcttgaactgttacccccgctagacaaatgcattggcaacgca
caaggatacttggagcctcttgaggatgatgaaaattttttggaatcttatgctaaatca
tggacgtctggtgtccttgacaaagctttacagcgtgattccatggccttcacattggta
aagcatcacctttcaggctttgtgttccagtccagcgattctggcaaaacgctgcgaaac
aagctggtaaaatcgcttatccggtgctatgcacagaagcggcatcatgaggttatgctt
aagagcttcgttctgcaaggcatcgcacaggattccaagagcagtggcaatgagcttgac
cggcggtttgaaatcttgaaggatgcttgtgagatgaactcctccctcttaggtgaagtc
cagagactgagggcatgtcttggccaatga
DBGET
integrated database retrieval system
