Sorghum bicolor (sorghum): 8071289
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Entry
8071289 CDS
T01086
Name
(RefSeq) ABC transporter B family member 4
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8071289
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbi02000
]
8071289
04147 Exosome [BR:
sbi04147
]
8071289
04090 CD molecules [BR:
sbi04090
]
8071289
Enzymes [BR:
sbi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8071289
Transporters [BR:
sbi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8071289
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8071289
CD molecules [BR:
sbi04090
]
Proteins
8071289
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_22
ABC_ATPase
Zeta_toxin
AAA_16
AAA_21
RsgA_GTPase
DEAD
DUF87
AAA_15
SbcC_Walker_B
AAA_30
SRP54
DUF815
G-alpha
DLIC
Motif
Other DBs
NCBI-GeneID:
8071289
NCBI-ProteinID:
XP_002439240
LinkDB
All DBs
Position
9:3158622..3164992
Genome browser
AA seq
1285 aa
AA seq
DB search
MSESSRAFHLDAPSSSSSSSSTAAAAGDRHHHHGKSAASASTTGGGSVPFHRLFAFADAA
DAALMSLGTLGALANGAAMPLMTVLFARLIDAFGGAADTRDVVARVSNVSLQFIYLAVAS
AVASFVQVASWMITGERQAARIRGLYLGAILRQEVAFFDQRATTGEVVGRMSGDTVLIQD
AMGEKVGKCIQLLVAFAGGFAVAFAQGWLLALVMLATIPPLVLAGALMSSVVARMASLGQ
AAYADAAGVVDQTIGSITTVASFTGEQRAVEKYSSSLKRAYSSGVWEGLAAGVGMGIVMV
LLFCGYSLGIWYGAKLILDKGYTGAQVMNVIFAVLTGSLALGQASPSMKAFAGGQAAAYK
MFETINREPEIDAYSTAGRKLDDIQGDIEFRDVYFSYPTRPDEQIFSGFSLTIQSGTTVA
LVGQSGSGKSTVISLIERFYDPQLGEVLIDGVDLREFQLRWIRSKIGLVSQEPVLFTASI
RDNIAYGKYNATDEEIRAAAELANASKFIDKMPQGFATSVGEHGTQLSGGQKQRIAIARA
ILKDPRILLLDEATSALDTESERIVQEALDRVMTNRTTVIVAHRLSTVRNAGTIAVIHRG
SVVEKGSHHDLIRDPEGAYSQLIQLQEASHASEGANYQNKSNRKGDSGIHLGKQMSTNQS
PSQRSPQNNSSNHSFSVSHGVPLEIDVQNSSSKNIDEEIQHEVPLSRLASLNKPEIPVLI
LGSIASAVSGMIFPIFAILLSNVIKAFYEPPRILRKDAEFWSSMFLVFGAVYFLSLPLGS
YLFSVAGCKLIRRIRLMTFEKVVNMEIEWFDYPENSSGAIGARLSADAAKVRGLVGDALQ
LVVQNLATLVAGLVIAFVSNWELSLIILALIPLIGLNGWIQMKFIQGFSADAKLMYEEAS
QVATDAVSSIRTVASFSAEEKVMDLYKKKCEGPLRAGIRTGITNGIGFGVSFFLLFGVYA
ASFYAGARLVENDKTTFPKVFRVFLALSMAAIGVSHTSTLTSDSSKAKSAVSSIFAIMDR
KSRIDPSDDAGVTLEPLSGNIEFRHVRFRYPTRPDVQIFQDLCLTIQSGKTVALVGESGS
GKSTAIALLQRFYDPNAGHILLDGVDIQKFQLRWLRQQMGLVSQEPSLFNDTIRANIAYG
KDGQATELDIVAAARLANAHKFISSLHQGYDTMVGERGAQLSGGQKQRVAIARAIIKDPK
ILLLDEATSALDAESERSVQDALDRVMVNRTTVIVAHRLSTIQGADVIAVVKDGVIVEKG
RHDALIKIEGGAYASLVALHSAAPS
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccagcagggcgttccacctcgacgcgccgtcctcctcctcgtcgtcgtcg
tccaccgccgccgctgccggcgaccgtcatcatcaccatgggaagtccgccgcctcggcc
tccaccacgggcggcggcagcgtgccgttccacaggctgttcgcgttcgcggacgccgcc
gacgccgcgctcatgtccctgggcacgctcggcgcgctcgccaacggcgccgcgatgccg
ctcatgacggtcctcttcgcccgcctcatcgacgccttcggcggcgccgccgacacgcgc
gacgtcgtcgcccgggtctccaacgtctcgctccagttcatctacctcgccgtcgcatcc
gccgtcgcctccttcgtccaggtggcgagctggatgatcaccggcgagcggcaggcggcg
cggatccgggggctgtacctgggtgccatcctgcggcaggaggtggcgttcttcgaccag
cgggccaccacgggggaggtggtggggcggatgtcgggggacacggtgctcatccaggac
gccatgggcgagaaagtcggcaagtgcatccagctgctcgtcgccttcgcgggcggcttc
gccgtcgccttcgcgcagggctggctcctcgcgctcgtcatgctcgccaccatcccgccg
ctcgtgctcgccggcgcgctcatgtccagcgtcgtcgccaggatggcttccctcggacag
gccgcctacgccgacgccgccggcgtcgtcgaccagaccatcggctccatcacgacagtc
gcgtctttcaccggcgagcagcgggcggtggagaagtacagcagctcgctcaagagggcg
tacagctccggcgtctgggaggggctcgccgccggcgtcggcatgggcatcgtcatggtg
ctcctcttctgcggctactccctggggatttggtacggcgccaagctcatcctggacaag
ggctacaccggcgcacaagtcatgaatgtcatcttcgcagtgctcactggctcactagct
ctgggccaagcatctccgagcatgaaagcattcgcgggagggcaggctgcggcatacaag
atgtttgaaacaatcaacagggagcctgagattgacgcgtacagcacggcaggtaggaag
ctggacgacattcagggagacattgagttcagggatgtttacttttcatatccgacaagg
cctgatgaacagatcttcagtggtttctcccttaccatacagagtggcacaactgtcgca
ctagttgggcagagtgggagtggcaagtcgacggttatcagcttgattgagcggttctac
gaccctcagctcggtgaagttctgatagacggtgttgatctaagggagttccagttgagg
tggatcagaagtaaaatcggtcttgttagccaagaaccggtcctgttcactgctagcata
agagacaacatagcttatggcaagtacaatgcaaccgatgaggaaatcagagctgcagct
gagcttgctaatgcctccaaattcatagataaaatgccccagggtttcgctacttcagtt
ggtgaacatggaacacaactttcaggtgggcaaaagcaaagaatagccattgccagagca
attctcaaagatccaagaatcttactattagatgaagcaacaagcgctctagacactgaa
tctgaaaggattgtacaggaggctcttgatagggtcatgacaaaccgtacaactgtcata
gttgctcaccgtttgagcactgtcaggaatgctggtaccattgccgtgattcatcgagga
tcagtagttgaaaaaggttcacaccatgatcttataagggatccagagggagcttacagt
caactgatacaactacaggaagcgagccatgcttctgagggtgcaaactaccagaacaag
tcaaacaggaagggtgattctgggattcacttaggaaaacaaatgtcgacaaatcagtca
ccaagccaaaggtcaccacagaacaatagcagcaaccactcgttctcagtatcacatggt
gtgcctctagaaattgacgtccaaaacagttcatcaaagaatatagatgaagaaattcag
cacgaagtgcctctcagtcgcctcgcctcacttaacaaacccgaaatcccagtgcttatc
cttggttctattgcttcggctgtcagcggaatgatcttcccaatctttgcgatacttcta
tcaaatgtgataaaagcattttatgagccgccacgtattctgaggaaggatgctgagttt
tggtcatctatgttcttggtattcggtgcagtgtacttcttgtcacttcctcttggctca
taccttttctcagtggctgggtgcaagttgataagaaggatcagactgatgacatttgag
aaggttgtcaatatggagatcgaatggttcgattacccagagaattcaagtggagcaata
ggcgcaaggctatcagcggatgcagcaaaagttcgggggcttgtgggtgatgcattgcaa
ctggtggtgcagaacttggcaactttagttgccggtctggtaattgcttttgtatcaaac
tgggagctctctcttattatactggctctgataccgcttattggcctcaatggatggatc
cagatgaaatttattcagggatttagtgcagatgcaaagttgatgtatgaggaggcaagt
caagtagcaactgatgcagtgagcagcataaggacagtggcatcattttcagctgaagaa
aaggtgatggatttgtacaagaaaaaatgtgaaggacctttaagagcagggatcaggaca
ggaataacaaacggtattggctttggggtttccttcttcttgctgtttggagtttatgct
gccagcttctatgctggtgcacggcttgtagagaatgataaaacaacttttcccaaagtt
ttcagggtatttcttgctctcagtatggcagcaatcggggtgtcacatacaagtaccctc
acatcagattcttccaaagcaaaatcagccgtatcttctatatttgccatcatggatcga
aaatcaaggatagatccaagcgatgatgctggggtaactctggagccactaagtggcaac
attgaatttcggcatgtgagattcagatatccaacacggcccgatgttcagattttccaa
gacctatgcctgacaattcaatctggaaagactgttgcacttgttggagagagtggtagt
ggcaaatcaacagcgatagcgttgctgcagagattctatgatcctaacgcaggccatata
ctcctagatggagtggacatacagaagttccagctgaggtggctaaggcaacagatgggg
ctggtgagtcaagaaccatccctgttcaacgacacgatacgggcaaacattgcctacgga
aaggacgggcaagcaacagaattagatatcgtggctgccgcacggttggcaaatgctcac
aagttcatcagttcactgcatcagggatatgacaccatggtcggggagcgtggggctcag
ctatcaggagggcagaagcagcgcgtcgccattgcccgcgccatcattaaggatcccaag
atccttctgctcgacgaagcgacaagcgccctcgacgcagaatccgaacgttcagtgcag
gacgccctggaccgggtgatggtgaacagaacaacagtgatcgtcgcgcaccggctgtcc
acgatacagggcgcggatgtgatcgcggtggtcaaggatggggtgatcgtcgagaagggg
aggcatgacgccttgatcaagatcgagggtggcgcttatgcgtccctcgtcgcgctccat
tcagcagcgccgtcgtaa
DBGET
integrated database retrieval system
