Sorghum bicolor (sorghum): 8076562
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Entry
8076562 CDS
T01086
Name
(RefSeq) uncharacterized protein LOC8076562
KO
K11985
TRAF-interacting protein [EC:
2.3.2.27
]
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbi04121
]
8076562
Enzymes [BR:
sbi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
8076562
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
8076562
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_5
zf-rbx1
Tektin
zf-RING_UBOX
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-C3HC4_2
FYVE
Motif
Other DBs
NCBI-GeneID:
8076562
NCBI-ProteinID:
XP_021320457
LinkDB
All DBs
Position
7:complement(3742571..3746725)
Genome browser
AA seq
669 aa
AA seq
DB search
MGIRVNFFSKSEFIYEHKSSHLRGKGTKSAPCPPRNLHCILKIREIARNQSGISSRLIFS
PQIQPHLRRGQPSHSPSDAAAAAMTVAAAAAWPVCTICYEDLRPLSDQHLHCLPACGHVF
HALCLEQWLEYCPGGKKKRTCPICKQACGAAHPPTRLYFSSTGTCPTQACPSSPGNASGG
ADPAALAAEVARLEHKAASLGKVVEEQRETIDDLKSQAALFREQMERGGFLLQAAKKEKE
SLQMLLSVKTEELSRKTSECGRLQEKSLALAKELAALKLSADMNLQEEEILKLASLGNHG
NLQNAVDVLKRSLAMRNKSYKELMVQCNVLGRSESRMQQKLEKAKELIKKLRARVLELEK
ELEDKENSLLRDLRSSKKFKADHIKSGNVTANNAFTSSSPGYENQTNNLDEVMQDPCNDK
TLDRLNPEAKRDLNAKDNLVNKNADVIDLEANASVFGGEQKAQYSAKPFGTDDRTLNSEN
KSNLCQNDDQQSMAFECTTTHVAEGGRFLKHQEATVKSTFMANIRAKLHIPQESPSVRTN
LTSSTWESETLTIDGISKQATRLASGTGPQQIHNINSLSDDFQAPGIPGMDGARKGIGKW
CKGSTAPGSASGNRGSLIAVGPDGRGGKVKILRDLGRSQDSKSQALWPKAPKVGNKGGQS
QIHHFFGKR
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggcatccgggttaatttcttttcaaaatcagaatttatatatgaacacaaatcttcc
cacctgcgcggaaagggcacgaaatccgccccatgcccgccacgaaatctccactgtatt
ttgaaaattcgtgaaatcgcgcgaaaccaaagcgggattagctctcgtcttatcttttcc
ccccaaatccaaccacatttgaggagaggccagcccagccactccccgtcggatgccgcc
gccgctgccatgaccgtcgccgccgccgccgcatggccggtctgcaccatctgctacgag
gatctccgcccgctctccgaccagcacctccactgcctccccgcctgcggccacgtcttc
cacgccctctgcctggagcaatggctggagtactgccccggcggcaagaagaagcgcacc
tgccccatctgcaagcaggcctgcggcgccgcgcacccgccgactcgcctctacttcagt
tccaccggcacgtgtccgacccaggcctgcccctcgtccccgggaaacgcctccgggggc
gccgacccggcggcgctcgcagccgaggtcgcccggctggagcacaaggcggcgtccctc
ggcaaggtggtcgaggagcagcgcgagaccatcgacgatctcaagtcccaggctgccttg
tttagggagcagatggagaggggaggctttttgctgcaagccgcgaagaaggaaaaagag
tctctccagatgctgctcagtgtgaaaacagaggagttgtcgaggaagacatcagagtgt
gggaggttgcaggagaagagccttgcattagccaaagagcttgcggcgctgaagctgtcg
gcagacatgaaccttcaggaggaagaaatccttaagttggcttcacttggtaaccatgga
aacctgcagaatgctgttgatgttttaaagagatcgcttgctatgcggaacaagagctac
aaggaattgatggtccaatgtaatgttttgggaagatcggagtctcgcatgcagcagaag
cttgagaaggccaaagagcttataaagaagttaagggcaagggtactggaacttgagaag
gaattagaagataaagaaaatagtttgttaagggacttgagatcttcaaagaaatttaaa
gcagaccatataaaatctgggaatgtcacagctaataatgctttcactagttcaagtcct
ggatatgaaaatcaaacaaacaacctcgatgaagtgatgcaggatccgtgcaacgacaag
actcttgaccggttaaatcctgaagctaagagggatctgaatgccaaagacaacctggtc
aacaagaatgcagatgtgatagacctagaagccaatgcttctgtttttggaggtgaacag
aaggctcaatattctgctaagccatttgggactgatgatagaacattgaattctgaaaac
aagtctaatctttgtcaaaatgatgaccaacagtccatggcgtttgaatgcacaaccaca
catgtagcagaaggagggcgcttcctcaaacaccaagaagcaactgtaaaatcaaccttt
atggcgaacattagggccaaactgcatattcctcaggagagtccttccgtgagaactaac
ttgacaagttcaacatgggagagtgaaacactgacaattgatggaatctccaaacaagca
actaggctggcatctggcactggacctcagcagattcacaacatcaattctctttctgat
gatttccaagcaccagggattcctggcatggatggagcaagaaaaggcattggcaaatgg
tgcaagggctcaacagctcctggttctgcaagtggaaacagaggcagtctgatagctgtg
ggaccagatggtcgaggagggaaggtcaaaatcctgagggaccttggccgatctcaggat
agcaagtctcaagcgttgtggcccaaggcaccgaaggttggaaacaaaggtggccagtct
cagatccatcacttctttggcaagagatga
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