Sorghum bicolor (sorghum): 8076667
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Entry
8076667 CDS
T01086
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi00280
Valine, leucine and isoleucine degradation
sbi01100
Metabolic pathways
Module
sbi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
8076667
Enzymes [BR:
sbi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
8076667
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
MCCA_BT
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
HlyD_D23
HlyD_3
Biotin_lipoyl_2
ATPgrasp_ST
ATP-grasp_4
Glucodextran_C
ATP-grasp_3
GARS_A
Motif
Other DBs
NCBI-GeneID:
8076667
NCBI-ProteinID:
XP_002442486
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Position
8:59402722..59409544
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AA seq
752 aa
AA seq
DB search
MASRLLHLHLRRGRVRVRGGSPAGSPVPAPAPARLLSSSPPPTASSASAGGGGGIEKVLV
ANRGEIACRVMRTARRLGVATVAVYSDADRGALHVRAADEAVRIGPPPARQSYLNAGAII
DAALRTGAQAIHPGYGFLSESADFAQLCETEGLKFIGPPASAIRDMGDKSASKRIMGAAG
VPLVPGYHGADQDIELLKLEADKIGYPVLIKPTHGGGGKGMRIVERPDEFVDAVLSAQRE
AAASFGVNTLLIEKYITQPRHVEVQVFGDQHGNAIYLYERDCSLQRRHQKIIEEAPAPNV
TAEFRSHIGGAAVSAAKAVGYYNAGTVEFIVDTLSGEFYFMEMNTRLQVEHPVTEMIVGQ
DLVEWQIRVANGERLPLSQEQIPLNGHAFEARIYAENVPRGFLPATGTLHHYRPVPSDPT
VRVETGVEEGDTVSMHYDPMIAKLVVWGESRTAALVKLKNCLSNFQIAGLPTNIGFLQEL
ASHSAFEKGLVDTHFIERYKDDLLSISTKSSEESHGVAVLGAILAAACICKKDHITFKES
QRANNTLSVWYNNPPFRMHHFARHPLDLELEENDGFSEKLLKLFITHKSDGSYFIETEDG
TSGLDVKVDHKGDHDFRVDVSGLQTDVTLASYSKGNSKHIHVWHGKHHHHYRQTVRAEHA
VDDSSQPCHASEGKSHPKGSVLAPMAGLVVKVLLEDGAQVEAGQPVMVMEAMKMEHVVKA
PRAGYVDGLKVTAGQQVFDSSVLFTIKDNIAN
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgcctcctccacctccacctgcgccgcgggcgcgtgcgcgtgcgcggcggg
agcccggcgggcagccccgtgcccgcgcccgcgcccgcgcggctcctctcctcctcgcct
cctccaaccgcgtcctcggcctcggcgggcggtggcgggggcatcgagaaggtgctggtg
gcgaaccggggcgagatcgcgtgccgggtcatgcgcaccgcgcgccgcctcggggtcgcc
accgtcgccgtgtacagcgacgccgaccgcggcgcgctgcacgtgcgcgccgccgacgag
gccgtcaggatcggcccgccccccgcgcgccagagctacctcaacgccggggccatcatc
gacgccgcactccgcaccggcgcacaggctatccatccaggatacggttttctctcagag
agtgctgattttgcgcagctctgtgagaccgaggggctcaaattcattggaccaccagca
tctgcgatcagagatatgggcgataagagtgcatccaagaggatcatgggtgctgctggc
gtgccgctggttccaggataccatggggctgaccaagacattgagctgctgaaacttgaa
gctgataaaattggttatcctgttttaatcaagcccacccatggtggagggggcaagggg
atgagaatagtcgaaaggcctgatgaatttgtggatgctgtactgagcgctcaacgggaa
gctgcagcatcatttggtgtaaacacactactgattgagaagtacattactcaaccaaga
cacgtagaagtccaggtatttggcgaccaacatggaaatgcaatatatctctatgagaga
gactgcagtctacaaagaaggcatcagaagattattgaggaagctccagctccaaatgtg
acagctgagtttcggtctcatattggtggagctgctgtatctgccgcaaaggcagttggt
tactacaatgctggaacagtggagtttattgtggatactctttctggagagttttatttc
atggagatgaatactcgactccaggttgaacacccagtgacagagatgattgttggtcaa
gatcttgtggagtggcaaatacgtgttgcaaatggagaacgactgccattatctcaggag
cagattccattaaatggacatgcatttgaagcacggatatatgctgaaaatgttccaaga
gggtttctccctgcaacaggaaccttacatcactaccgaccagtcccttctgatccaaca
gtaagagttgaaactggagtcgaagaaggagatacagtcagcatgcattatgatccaatg
atagccaaacttgtagtatggggtgaaagtcgcactgctgcactagtcaagctaaagaac
tgtttatcaaactttcagattgcaggtttgccaaccaatattggtttcctccaagaactc
gcaagccatagtgcctttgaaaaaggcctagttgacactcacttcattgaacgttataaa
gatgatcttttgagtatttctacgaagtcctcagaagaatctcatggtgtagctgtgctt
ggtgcaattttggctgctgcatgcatttgcaagaaggatcacattacatttaaagaatca
caacgagccaacaacacactatctgtatggtacaataatccacctttcaggatgcatcac
tttgctaggcatcccctggatcttgagttggaagagaatgatggattcagtgagaaactt
cttaaactgttcattactcataaatctgatggaagctacttcatcgagacagaagatggc
acttctggtttagatgtcaaagttgatcacaagggtgaccatgattttcgtgtcgatgtt
tctggtctgcaaactgatgtgactctagcatcttattcgaagggcaacagcaaacatata
catgtctggcatgggaagcatcatcaccattacagacagactgtaagagctgagcatgca
gttgatgatagctcccaaccttgtcatgcttctgaagggaagtcacatccaaaagggagt
gttctggcaccaatggctggcttggttgtgaaagttttgcttgaagatggggcacaggtg
gaggcagggcagcctgtcatggttatggaagcaatgaagatggagcatgttgtcaaagca
cctcgtgccggatatgtagatggcctgaaggttactgctggccaacaagtttttgactcc
agtgtccttttcacaatcaaggacaatattgcaaactga
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