Sorghum bicolor (sorghum): 8079384
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Entry
8079384 CDS
T01086
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit 4
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
8079384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbi03009
]
8079384
03032 DNA replication proteins [BR:
sbi03032
]
8079384
Ribosome biogenesis [BR:
sbi03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
8079384
Prokaryotic type
8079384
DNA replication proteins [BR:
sbi03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
8079384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
PUA
TruB_N
UPF0113
Motif
Other DBs
NCBI-GeneID:
8079384
NCBI-ProteinID:
XP_002463248
UniProt:
C5X3A6
A0A921RU70
LinkDB
All DBs
Position
2:complement(74291103..74293230)
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AA seq
586 aa
AA seq
DB search
MSSTPPAVASPASEQTKSKKKKKHKSKDIPATDPPSLAEAEEKTDGYLIKPQSLVPSLDT
STWPLLLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEHLRYGVINLDKPSNPSSHEVVAWI
KRILRAEKTGHSGTLDPKVTGNLIVCVDRATRLVKSQQGAGKEYVCVARFHAAVPDTARV
ARALEALTGAVFQRPPLISAVKRQLRVRTIYESKLLEHDPERHLAVFWISCEAGTYVRTL
CVHLGLLLGVGAHMQELRRVRSGILGEQDNMVTMHDVMDAMWSLDNYKDESYLRRVVMPL
EVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIETGEEVVLMTTKGEAIAIGIAE
MTTAVMATCDHGAVAKIKRVVMDRDTYPRKWGLGPVALKKKKMIAEGLLDKHGKPNEKTP
AEWLRNVEVVLPTGGDVSIASIAAAPEPEKVKVEQDAVIHEEVKEKKKKRQKDENNDDDA
SVPAKKIKVEEAAEAVEGEKSEKKKKKKKDKGESESADAVEVKEAEKADVADEKGSEKKK
KKKKSKEGSAAVDPESAEHVDGAGDEKSEKKKEKKKKKSRDTDEAE
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccacgccgccggccgtcgcatcccccgcctccgagcaaaccaaatccaagaag
aagaagaagcacaagtccaaggacatccccgccaccgacccgccgtcgctcgccgaggcc
gaggagaagactgatggctacctaatcaagccccagtccctggtgccgtccctcgacacc
tccacctggccgctcctcctcaagaactacgaccgcctcaacgtccgcactggccactac
accccgctcccctcaggccactcaccgctcaagcgccccctcgccgagcacctccgctac
ggcgtcatcaacctcgacaagccgtcgaacccgtcctcccacgaggtggtcgcctggatc
aagcgcatcctccgcgccgagaagaccggccacagcggcacgctcgaccccaaggtcacc
ggtaacctcatcgtctgcgtggaccgcgccacgcgccttgtcaagtcgcagcagggcgcc
ggcaaggagtacgtctgcgtcgcccgcttccacgccgccgtgccggacaccgcgcgcgtg
gcacgtgcgctagaggcgctcacgggcgccgtgttccagcgcccgccgctcatctccgcg
gtcaagcgccagctcagggtgcggaccatctacgagagcaagctcctggagcacgacccc
gagcgccacctcgcggtgttctggatctcctgcgaggcaggcacctatgtgcggaccctg
tgtgtgcaccttgggctgctccttggtgtcggcgcacatatgcaggagctgcgtcgtgtc
cggtcggggatcctcggggagcaggacaacatggtgaccatgcacgacgtgatggacgcc
atgtggtcgcttgacaactacaaggacgagtcctacttgaggcgcgtcgtcatgccactg
gaggtactgcttacaagctacaagaggcttgtcgtgaaggattctgccgtgaatgctatc
tgctatggtgctaagcttatgatccctggcctgctccggtttgagaatgatatcgagaca
ggggaggaggttgttctgatgacaacaaagggggaggcgattgccataggaattgccgag
atgaccactgctgttatggcaacctgtgaccatggtgctgttgcaaagatcaagagggtt
gtgatggacagagacacatacccaaggaagtgggggcttggtccagtggcactcaagaag
aagaaaatgatcgccgagggcctccttgataagcatgggaagccaaatgagaagacccca
gccgagtggcttcgcaatgtggaagtggtgcttcccactggtggtgatgtatcgattgct
agcattgcagctgctcctgagccagagaaggtgaaggtggagcaggacgcagtcatccat
gaagaggtcaaggagaagaaaaagaagaggcagaaggatgagaacaatgacgacgatgct
tctgttccggccaagaagatcaaggttgaggaagctgccgaggcagtggaaggggagaag
agcgagaagaagaagaagaaaaagaaagataagggcgaatcagaatcagcagacgcggtg
gaagtgaaggaggcagagaaggctgatgtggctgatgagaagggcagcgaaaagaagaag
aagaagaagaagagcaaggaaggaagcgccgctgtggatccagagagtgctgagcatgta
gatggtgcgggagacgagaaaagtgagaagaaaaaggagaagaaaaagaagaagagtcga
gacacagatgaggcagagtaa
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