Sorghum bicolor (sorghum): 8079442
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Entry
8079442 CDS
T01086
Name
(RefSeq) putative multidrug resistance protein
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8079442
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbi02000
]
8079442
04147 Exosome [BR:
sbi04147
]
8079442
04090 CD molecules [BR:
sbi04090
]
8079442
Enzymes [BR:
sbi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8079442
Transporters [BR:
sbi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8079442
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8079442
CD molecules [BR:
sbi04090
]
Proteins
8079442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
AAA_29
Zeta_toxin
ABC_ATPase
RsgA_GTPase
AAA_21
AAA_15
DUF815
AAA_30
G-alpha
AAA_25
APS_kinase
Motif
Other DBs
NCBI-GeneID:
8079442
NCBI-ProteinID:
XP_021316184
LinkDB
All DBs
Position
4:complement(5922772..5928606)
Genome browser
AA seq
1251 aa
AA seq
DB search
MLTTKFALVFKHADAVDVALMVVGLVGAIGDGMSTPVMLAITSRVFDDAGSGPDHLQQFV
PKMNENVRYTLYLAAAHGITAFLEGYCWTRTAERQAKRMRLRYLRAVLRQDVEYFDLKTG
GSTSSEVITSVSNDSLAVQDVLSEKLPNFLTNVAAFVASYAVAFLLMWRLTLVALPSVLL
LIIPGFLYSRVLISLARRIRELHTRPGAIAEQAISSVRTVYSFVAERSTAARFAAALDES
VRLGLKQGLAKGVALGTGGIRIAILAFTVWYGSRLVMYHGYRGGTVYNVALIIVFGGGAL
GTALSNIKYLSEATSAAERIMELIRRVPKIDSESSAGDVLDNVAGEVEFRNVEFCYPSRP
KSPIFVNFNLHVPAGRTVALVGESGSGKSTVIALLERFYDPSAGEVTLDGVDIRRLRLKW
LRAQMGLVSQEPALFATSIRENILLGKEDATEEEVVAAANAANAHSFISQLPRGYDTQVG
ERGIQMSGGQKQRIAIARAILKSPKILLLDEATSALDTNSEHVVQEALDLASMGRTTIII
AHRLSTIRNAHLIAFMKSGEVKELGSHDDLIANENGLYSTLVHLQQTRDPTETTEVCETR
NAYVMLQSNKQSRGFSTASRSITTRSMGDTKDNGNIENPKLPVPSFKRLLMLNAPEWKQG
LLGSFSAIVSGGIQPAFCYIMGSMISIYFSTDHEEIKEKTRTYALISIGLAMLTFMVNIG
QHYNFASTGEYLTKRVREQMLAKYLTFEIGWFDQDDNSSSSICSRLTTDANIVRSLVGDR
MSLVIHTVSAVLTAYIMGLVIAWRLAILMIAVQPFSIICYYTRYVLLKSMSEKSTQAQAE
CSKLAAEAVSNLRTISAFSSQNRIMCLFDQAQEGPCKESIRQSWFAGIGLGTSTSLLRCT
WALTFWYTGILLDGHHITAKAFFQTFLILISTTLVIADAGSMTADLAKGADAVASVFAIL
DRETKIDPDNPEGYKPEKLKGEVDIRGVDFAYPSRPDVIIFKRFSLSIQPAKSTALVGQS
GSGKSTIIGLIERFYDPTSGVVEIDCKDIKAYNLRSLRQHIGLVSQEPTLFAGTIRENIV
YGTEAASEEEIENAARSANAHGFISNLKDGYETRCGEQGVQLSGGQKQRIAIARAILKNP
AILLLDEATSALDSQSENVVQEALDRLMVGRTSIVVAHRLSTIQNCNMIVVLEKGVVVET
GTHASLMTKGPAGTYFGLVNLQQGGNQVNNAMALQENPSIPDLQPKITTLD
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgacgaagttcgccttggtgttcaagcacgcagatgcagtggacgtggcgcta
atggtggtgggcttagtgggcgccattggcgacggcatgtccacgccggtgatgctggcc
atcaccagccgcgtcttcgacgacgctggcagcggccctgatcatctccagcagttcgtc
cccaagatgaatgagaacgtgaggtacaccctctacttggctgccgcacacgggatcacg
gcgttcctagagggatactgctggacgcggacggcggagcggcaggcaaagcggatgcgg
ctgcgataccttcgggcggtgctccggcaggacgtggagtacttcgacctcaagaccggc
ggctccacgtcgtcggaggtgatcaccagcgtctccaacgacagcctcgccgtgcaggac
gtgctgagcgagaagctgcccaacttcttgacgaacgtcgccgcgttcgtggccagctac
gccgtcgcgttcctcctgatgtggcggctcacgctggtggcgctgccatccgtgctgctg
ctcatcatccccggcttcctctacagccgcgtcctcatcagcctggcgcgccggatcagg
gagctgcacacgcgcccgggcgccatcgccgagcaggcgatctcgtcggtgcgcaccgtc
tactcgttcgtcgcggagagatccaccgcggcgcggttcgccgccgcgctggacgagtcg
gtgcggctcgggctcaagcaggggctcgccaagggcgtcgccctcggcaccggtggcatc
cgcatcgccatcttggccttcaccgtctggtacggcagccgcctcgtcatgtaccatggc
tacagaggcggcaccgtctacaacgtcgccctcatcatcgtattcggaggcggagcactg
gggacggcgctgtcaaacatcaagtacttgtcagaggcgacctcggcggcggagaggatc
atggagctgatcaggcgggtgcccaagatagactcagagagtagcgccggcgacgtgctg
gacaacgtcgccggcgaggtggagttcaggaacgtggagttctgctacccgtcgcgaccc
aagagccccatcttcgtcaacttcaacctgcacgtgccggccgggcgcacggtggcgctg
gtcggcgagagtgggtcagggaagtcgacggtgatcgcgctgcttgagcgcttctacgac
ccgtcggccggggaggtgaccctggacggcgtggacatccggcggctgcggctcaagtgg
ctgcgcgcgcagatggggctcgtcagccaggagccggcgctgttcgcgacgtcgatccgg
gagaacatcctgctcggcaaggaggacgccacggaggaggaggtcgtcgccgcggcaaac
gcggccaacgcccacagcttcatctcgcagttgccgcggggatacgacacgcaggtaggt
gagcgtggaatccaaatgtctggagggcagaagcaaaggattgctattgctagagcaatc
ctaaagtcacccaagatccttctccttgatgaagctactagtgcattagacactaattca
gagcatgtggtccaggaggcacttgacctggcctccatgggtcgaactactattatcatt
gcacatcggctctctaccatacgaaatgctcatttgattgctttcatgaagtctggtgag
gttaaggagttgggctcccatgatgacctcattgccaatgagaatggcctttactcaact
cttgtccaccttcaacagaccagagatccaactgagactaccgaggtttgtgagactagg
aatgcatatgttatgttgcaatcaaacaagcaaagtaggggtttctctacagcaagtagg
tcgatcacaacaaggtcaatgggtgatacaaaagacaatggtaacatagagaatccaaag
cttcctgtgccatccttcaagaggctactaatgctcaatgcaccagagtggaagcagggg
ttgttggggagctttagtgcaattgtctctggaggcatacaacctgcgttttgctatatc
atgggcagcatgatttcgatctacttctctacagatcatgaagagatcaaggagaaaaca
aggacttatgcacttatctccatcggccttgcaatgctcacgttcatggttaatattggg
caacactacaattttgcttccacgggggaatacctcaccaagagggtcagagaacaaatg
ctcgctaaatatctcactttcgagattgggtggtttgaccaagatgacaactctagtagt
tccatatgctcacggcttaccactgatgccaacattgtgaggtcgcttgtgggtgatcga
atgtctctagtgatccatacagtttcagctgttctaactgcctacatcatgggtctggtg
attgcttggcgtttagcaattttgatgattgcagtgcagccatttagcattatctgctat
tatactcgctatgtcttattaaagagcatgtctgagaaatcaacacaagcacaagctgaa
tgtagtaagctagctgctgaggccgtctctaatcttcgaaccataagtgctttctcatcc
cagaatcgcatcatgtgcctatttgaccaagcacaagaaggcccatgcaaggaaagcata
agacagtcctggtttgcaggtattggccttggcacctccacaagccttttgagatgcaca
tgggcactcaccttctggtatactggcatactcctagatgggcaccacattactgcaaag
gcctttttccaaacctttctaattctaataagcacaacattggtgatagcagatgcaggc
agtatgacagcagatcttgctaagggtgctgatgcagttgcttcagtgtttgccattctt
gacagggaaacgaaaatagatcctgacaaccctgagggatataaaccagaaaagctcaaa
ggcgaagtggacattagaggagttgattttgcatatccatcaagaccagatgtgatcatc
tttaagagattctccttgagcatccaaccagctaagtcaacagcacttgttgggcaaagt
ggttcaggcaaatcaaccatcattgggcttatagagaggttctatgacccaactagtggg
gtagtagagatcgattgtaaagacatcaaagcatacaatcttcggtccttacgacagcac
attgggctagttagccaagagccaacactgtttgcaggtaccattagagagaacattgtg
tatggcacagaagcagctagtgaggaagaaattgagaatgcggcaaggtcagcaaatgca
catggcttcattagcaacctcaaggatggatatgagacaaggtgtggtgagcaaggtgtt
caattgtctggaggacagaagcagcgcattgcaatcgctcgtgcaatattgaagaaccct
gctatcttgctactagatgaagctactagtgcattggacagccagtctgagaatgtggtc
caagaggcattggaccgactcatggtcggcaggacaagtatagtggtggcacacaggctg
agcactattcaaaactgcaacatgattgttgtgcttgagaaaggagttgttgtggagaca
ggaacacatgcatccctcatgaccaagggtcctgccggaacatactttggattagttaat
ttgcagcaaggaggcaaccaggtgaacaacgctatggctttgcaagagaacccatcaatt
ccagatttgcagcctaaaatcaccactttggattaa
DBGET
integrated database retrieval system
