Sorghum bicolor (sorghum): 8079443
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Entry
8079443 CDS
T01086
Name
(RefSeq) putative multidrug resistance protein isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
8079443
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbi02000
]
8079443
04147 Exosome [BR:
sbi04147
]
8079443
04090 CD molecules [BR:
sbi04090
]
8079443
Enzymes [BR:
sbi01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
8079443
Transporters [BR:
sbi02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
8079443
Exosome [BR:
sbi04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
8079443
CD molecules [BR:
sbi04090
]
Proteins
8079443
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_21
AAA_22
AAA_15
ABC_ATPase
Zeta_toxin
RsgA_GTPase
DUF87
DUF815
AAA_25
SRP54
APS_kinase
AAA_28
Motif
Other DBs
NCBI-GeneID:
8079443
NCBI-ProteinID:
XP_002453446
LinkDB
All DBs
Position
4:complement(5942617..5948744)
Genome browser
AA seq
1262 aa
AA seq
DB search
MCGMHPQRYLLTGRTHSMAKEESPEMAKTAPVLRSFALLFMHADAVDVALMALGLLGAIG
DGMSMPVMLTIMSHVFNDAGSGPDRLQQFSSKMNQNARNTLFLAAACFVMAFLEGYCWTR
TAERQASRMRLRYLRAVLRQDVEYFDLKAGCTSPEVVTGISNDSLVVQDALSEKLPNFVV
SVTTFVGSYAVGFALQWRLTVVALPSVLLLVIPGLLYSRVQLGLARRIREQYRRPSAIAE
QAISSVRTVYSFVAERSTAARFSAALEELVPLGLKQGLAKGVAVGSNGITYAIFAFNIWY
GSRLIMHHGYRGGTVYIASVVTVHGGVALGSALSNIKYFSEASAAAERITELIKRVPKID
SESGAGDVLENVTGEVEFRNVDFCYPSRPETPIFVNFSLHVPAGRSVALVGASGSGKSTV
IALLERFYDPSAGEVTLDGVDIRRLRLKWLRAQMGLVSQEPALFATSIRENILFGKEDAT
EEEIVAAAMAADAHNFISTLPQGYDTQVGERGIQMSGGQKQRIAIARAILRSPKILLLDE
ATSALDTNSERVVHEALELASMGRTTIVVAHRLSTVRNANIIVVMQAGEVKELGSHGDLI
ANENGLYSSLVHLQQTRDSIDTNKVGGTTSQIMSRAFTTASRTRSTWSICDTKHDDNKDN
SNIPVPSFMTMLMLNAPEWKQALIGSFSAIVIGGIQPIFAYSIGSMMFVYFSTNHEEIKE
KTRAFALISISLAVISFLTSIGQHYNFAAMGEFLTKRVREQMFAKFLTFEIGWFDCDKNS
TGSICSQLTRDSNNVRSLLGDRMSLVIQTVSAVVTTYLMGLVIAWRMALVMIALQPLTIV
CFYARRVLLKSMSKKSKNAQHKCSKLASEAISNLRTITAFSSQNHVLCLFDQAQDGPRKE
SIRQSWFAGIILGTSMGLLKCTWALTLWYSGMLMARHYITAKAFFQTFLILVTTGRVIAE
AGSVTTDLAKGADAVASVFGILHRETKMDPDNPEGYKPEKLKGEVHIRGVDFVYPSRPDV
IIFKGFSLSIQPGKSTALVGKSGSGKSTIIGLIERFYDPTNGVVEIDLKDIKTYNLRALR
QHIGLVSQEPTLFAGTIRENIVYGTEAASDEEIENAARSANAHGFISNLKDGYETRCGEQ
GVQLSGGQKQRIAIARAILKNPTILLLDEATSALDNQSEKVVQEALDRMLVRRTSVVVAH
RLTTIQNCDMIIVLDKGVAVETGTHASLMAKGPAGTYFGLVNLQQGCNNLHENTLVPDLQ
LC
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgtgcggcatgcatccccagcgctacctcctcaccggccggacacatagtatggctaag
gaggagtcgccagagatggcgaagacagcgccggttctgaggtcattcgcgctgttgttc
atgcacgcagacgcggtggacgtggcgctgatggcgctgggcctgctgggcgccatcggc
gacggcatgtccatgccggtaatgctaactatcatgagccacgtcttcaacgatgcaggc
agcggccctgatcgcctccagcagttcagctccaagatgaatcagaacgcgaggaatacc
ctcttcctggctgccgcatgctttgtcatggcgttcctagaggggtactgctggacgcgg
acggcggagcggcaggcgtcgcggatgcggctgcgttaccttcgggcggtgctccggcag
gacgtggagtacttcgacctcaaggccggctgcacgtcgccggaggtggtcaccggcatc
tccaacgacagcctggtggtgcaggacgcgctgagcgagaagctgcccaacttcgtggtg
agcgtcaccacgttcgtgggcagctacgccgtcgggttcgcgctgcagtggcggctcacg
gtggtggcgctgccgtccgtgctgctgctcgtcatccccggcttgctctacagccgagtc
cagctcggcctggcgcgccggatcagggagcagtacaggcgcccgagcgccatcgccgag
caggcgatctcgtcggtgcgcaccgtgtactcgttcgtcgcggagaggagcaccgcggcg
cggttctccgccgcgctggaggagctggtaccgctcggcctgaagcaggggctcgccaag
ggcgtcgccgtcggcagcaacggcatcacctatgccatcttcgccttcaacatttggtac
ggcagccggctcatcatgcaccacggctacaggggcggcaccgtctacatcgcctctgtc
gtcactgtacacggaggcgtagcgctagggtcggcactgtcgaacatcaagtacttctcg
gaggcaagcgcggcggcggagaggatcacggagctgatcaagcgagtgcccaagatagac
tcggagagtggcgccggcgacgtgctggagaacgtcaccggcgaggtggagttcaggaac
gtggatttctgctacccttcgcggccggagacccctatcttcgtcaacttcagcctgcat
gtgccggccgggcgatcggtggcgctggtgggcgccagtgggtcagggaagtcgacggtg
atcgcgctgctggagcggttctacgacccgtcggccggagaggtgaccctggacggtgtc
gacatccggcgactgcggctcaagtggctgcgcgcgcagatggggctcgtcagccaggag
ccggcgctgttcgcgacgtcgatcagggagaacatactgttcggcaaggaggacgccacg
gaggaggagatcgtagctgcggcgatggcggccgacgcccacaacttcatctcgacgttg
ccgcagggctacgacacgcaggtgggtgagcgtggtatccaaatgtctggaggacagaag
caaaggattgctattgccagagcaatcctaagatcgcctaagatccttcttcttgatgaa
gccactagtgcactagacacgaattcagaacgtgttgtgcatgaggcacttgagttagcc
tccatgggacgaactactattgttgtcgcacatcgtctctccactgttcgaaatgccaat
attattgttgtcatgcaggctggtgaggttaaagaattgggatcacatggtgatctcatc
gccaacgagaatggcctctattcatctcttgtccaccttcagcagaccagagattcaata
gacaccaataaggttggtggaactacaagccaaattatgagcagggctttcactacagct
agtaggacaagatcaacatggtcaatttgtgatacaaaacatgatgacaacaaagataat
tcaaatattcctgttccatccttcatgacaatgcttatgcttaatgcgccagagtggaag
caagcgttgataggaagcttcagtgcaattgtgattggaggcatacaaccaatatttgca
tattccattggaagcatgatgtttgtctacttttcaactaatcatgaagagatcaaggag
aaaacaagggcttttgcacttatttccatcagccttgcagttatttcattcttaactagt
attgggcaacattataactttgctgccatgggggaattcctaaccaagagggttagagaa
caaatgtttgcaaaatttctcactttcgagattgggtggtttgactgtgataagaactct
actggttccatatgctcacaacttaccagagactccaacaatgtgaggtcactcctgggt
gatcgaatgtctctggtcatccagacagtttctgcggttgtaactacctacttgatgggt
ctggttatagcttggcgtatggccctcgtcatgatagcattacaaccccttaccattgtt
tgcttttatgcccgccgtgtcttactgaagagcatgtccaagaaatcaaaaaatgcacaa
cataaatgtagtaagctagcttctgaggctatctctaatcttcggaccataactgctttc
tcatcccagaaccatgtcttgtgcctcttcgaccaagcacaagatggtccacgcaaggaa
agcatccgacagtcctggtttgcaggtatcatccttggcacctctatgggccttttgaaa
tgcacatgggcactcaccttgtggtatagtggtatgctcatggctaggcactacattaca
gcaaaggcattcttccaaaccttcttgattctagtaaccacaggacgtgtgattgcagaa
gcaggtagtgttacaacagatcttgctaagggtgctgatgcagttgcttcagtgtttggc
attcttcatcgagaaacaaaaatggatcctgacaaccctgagggttataaaccagagaag
ctcaaaggtgaggtgcacattagaggagttgattttgtatatccatcaagaccagatgtg
atcatcttcaaaggattctccttgagcatccaaccaggcaagtcaacggcacttgttggg
aaaagtggttctggaaagtcaactattattggacttatagaaaggttctacgatccaact
aatggggtagtagagattgaccttaaagacatcaaaacatacaatcttcgtgccttgcga
caacatattggactggttagccaagagccaacactatttgcaggtaccattagggagaac
attgtgtacggcacagaagcagctagtgacgaagaaattgagaatgcagcaaggtcagca
aatgcacatggcttcattagtaacctcaaggatggatatgagacaaggtgtggtgagcaa
ggtgttcaactgtcaggaggacagaagcagcgcattgcaatcgctcgtgcaatattgaag
aaccctactatcttgctattagatgaagctactagtgcattagacaaccagtcggagaag
gtggtccaagaggcattggaccggatgttggtcagaaggacaagtgtagtggtggcacac
aggttgaccactattcagaactgtgacatgattattgtgcttgataaaggagttgctgtg
gagacaggcacacatgcatccctcatggccaagggtcctgccggaacatattttggattg
gttaatttgcagcaaggatgcaacaatttgcatgaaaacacattagttccagatttgcaa
ctctgttga
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