Syngnathoides biaculeatus (alligator pipefish): 133491422
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Entry
133491422 CDS
T09681
Symbol
tcerg1b
Name
(RefSeq) transcription elongation regulator 1 isoform X1
KO
K12824
transcription elongation regulator 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133491422 (tcerg1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133491422 (tcerg1b)
Spliceosome [BR:
sbia03041
]
Complex A
U1 snRNP components
U1 related factors
133491422 (tcerg1b)
Complex B
133491422 (tcerg1b)
BRITE hierarchy
Motif
Pfam:
FF
WW
RhoGAP-FF1
Motif
Other DBs
NCBI-GeneID:
133491422
NCBI-ProteinID:
XP_061658482
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All DBs
Position
18:9155781..9170505
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AA seq
1063 aa
AA seq
DB search
MADQAESEVIGFGDNRMAQQAVRFHGPGPAPVPTAPVSTSTVPPPAQTPVLRGPPPLLRP
PPPPFGMMRGPPPTRPPFPRPPFDPSMPPIPPPGGMPPPMAPPHLQRPPFLPPPMGNLPP
PPGMLFPPGMPPVPSSGSPALNPTEEIWVENKTPEGKAYYYNARTRESAWTKPEGVKVIQ
QSELNPLLGTGAGTGAATASTGVGAASAAGAAATGSGGINTTAGAVVSAVTAPSSAPART
LSSSPECTTTLAPSVTIAANPVADPAPAPAASSSAAVSPVSVVTVSTVPSPVTAVQTVPL
LPAALPHSVAQPAAAIPAFPPVMVPPFRVPLPGMHIPLPGVAMMQIVGAPCVKAGPAANG
MLPSMGPSLVSMMHPQLALSAAPAASVAAALQLPEWSEYKTVDGKNYYYNNRTLESTWEK
PQAMLDREKEAEKAKEHLAQVEAEAMEMEEEEAKLLIMNSIKQERKEEEMSEEEKAAQKA
RPVATNPIPGTPWCVVWTGDERVFFYNPTTRLSMWDRPDELVGRADVDKHIQEPPHKRGL
DDARRTGDPTRLVFLLFEFVTFFVCTVFSKDDSELALTMDDAHDEEPSKAKKRKKEDVSE
ADSEKEAVMEAELRAARERAVVPLESRITQFKDMLLERGVSAFSTWDKELHKIVFDPRYL
LLNPKERKQVFDQYVKTRAEEERKEKKNKLMQTKDEFRKMMDEAKLTARTTFSEFAIKHG
RDPRFKSIDKMKDREAIFVEHMTALRKRDKDDSKSRGDKVRQDFFEMLSDQHVEAGQRWS
KVKERMETDPRYKAVETSALREEFFKQYLDKLAKSLDLEKERELERQARIEASLRERERE
VQKARSEQTKEIDREREQHKREEAIQHFKALMSDMVRSPDATWSDTRRNLRKDHRWESAS
LLEREEKEKLFNDHVEALAKKKKEHFRQLLDETTMITLTTTWKEVKKVIKEDPRCIKFSS
SDRKRQREFEDYIKDKYITAKADFRTLLKETKFITYRSRKLIQESEQHLKDVEKILQNDK
RYLVLECVPEERRKLIMFYIEDLDRRGPPPPPTASEPTRRSTK
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaggcggagagcgaagtgatcggattcggcgacaacagaatggcccagcag
gccgtgcggtttcatggacccggaccggcgcccgtgcccacggcccccgtctccacctcc
accgtgccgccccccgcccagactcccgtgttgcgtgggcctccgcctctactcaggccg
ccgccgcccccctttggaatgatgagggggccaccgccgactcgccccccgtttccgcgg
ccaccctttgaccccagcatgccccccatcccgccgccgggaggcatgccaccccccatg
gcaccgccgcacctgcagagacccccgtttctcccccctcccatgggcaaccttccgccc
cctccggggatgctcttccctcccgggatgcccccggttccttcttctggaagccccgcg
ctcaacccgaccgaggagatctgggtggagaacaagacacccgagggaaaagcttattac
tacaacgctcgcacccgagagtcggcatggaccaaacccgagggcgtgaaagtcatccag
cagtcagaactcaaccctctactggggaccggggcaggcaccggcgcggccacggcgagc
accggcgtcggggccgccagcgcggcgggtgccgcggccaccggctccggcggcatcaac
accacagccggcgccgtcgtctcagccgtcacggccccgtccagcgcccccgcccgcacg
ctcagctccagcccggaatgcaccaccaccttggcacccagcgtcaccatagcagccaat
ccggtggccgaccccgcccccgcccccgcggccagctcgtccgccgccgtgtccccggtc
agcgtggtgacggtgtctacggtgccgtcccccgtcacagctgtgcagacagtcccgctg
ctgcccgccgccctgcctcatagcgtggcccagcccgccgccgccatccccgccttcccg
cccgtcatggtgccgcccttccgggtgcccctgccgggcatgcacatccctctgccaggt
gtagcaatgatgcagatagttggcgctccctgtgtaaaggcaggccccgctgccaacgga
atgctgcccagcatgggcccgtctctggtgtccatgatgcaccctcagttggcgttgtcg
gcggcgcccgccgcctccgtggccgccgcgttgcagctccccgagtggtccgagtacaag
acggtggacggcaagaattactactacaacaaccgcactcttgagtccacctgggaaaaa
ccgcaggccatgctggacagagaaaaggaagcggagaaggccaaggagcatctggcgcag
gtggaagccgaggccatggagatggaggaggaggaggccaaactcctcatcatgaatagc
atcaagcaggagcgcaaggaggaagaaatgagcgaagaagagaaggcggcccagaaagct
cgcccggtggccaccaaccccatcccgggcacgccgtggtgcgtggtgtggaccggcgac
gagcgcgtcttcttctacaaccccaccacgcgcctgtccatgtgggaccggccagacgag
ctggtgggccgcgccgacgtcgacaaacacatccaggagcccccgcacaagcggggcctc
gacgacgccagaagaacaggtgacccgacgcgtttggtttttctgttatttgagtttgta
actttctttgtgtgtacagttttcagcaaggacgatagcgagctggccctcaccatggac
gacgctcacgatgaggagccctccaaagcaaagaagagaaagaaggaggatgtgagcgaa
gcagactcagagaaggaagcagtgatggaagcagagctgcgggcggcccgggagagagcc
gtggtccccctggagtccaggataacgcagttcaaagacatgctgctggagagaggggtg
tctgctttctccacgtgggacaaagagcttcacaagattgtcttcgaccctcgatacctt
ctgctcaaccccaaagaacgcaagcaggtgttcgaccagtacgtgaagaccagagcggag
gaggagaggaaggagaaaaagaacaagctgatgcagaccaaagacgaattcaggaagatg
atggacgaggccaagctgacggccaggaccaccttcagcgagtttgccatcaagcacggc
cgagaccctcgcttcaagagcatcgacaagatgaaggacagggaagccatcttcgtggag
cacatgacggccctgaggaagcgggacaaagatgactccaagtcccgaggggacaaggtg
agacaggacttcttcgagatgctgagcgaccagcacgtggaagctgggcagcgctggagc
aaagtcaaggagaggatggagacggacccccgctacaaggcagtggagacctccgccctc
agggaggagttcttcaagcagtacctggacaagctggccaagagcctggacttggagaag
gagcgagagctggagcgtcaggcgcgcatcgaggccagcctgagggagcgcgagcgggag
gtccagaaggcccgatcggaacagaccaaagagatcgaccgcgagcgagagcagcacaag
cgggaagaagccatccagcacttcaaagcgctcatgtccgacatggtgcgctcgccggac
gcgacgtggtcggacacgcggcggaacctccgcaaagaccaccgctgggagtcggcgtcg
ctgttggagcgcgaggagaaggagaagctcttcaacgaccacgtggaggcgctggccaag
aagaagaaggagcatttcaggcagctcctggacgaaaccaccatgatcactctgaccacc
acctggaaggaggtcaagaaggtcatcaaggaggaccctcgatgcattaaattctcctcc
agtgacagaaagcgacagcgcgagtttgaggactacatcaaagacaaatacatcaccgcc
aaagctgacttcagaaccctcttgaaggagacaaagttcatcacgtacaggtcccggaag
ttgatccaggagtcggagcagcacctgaaggacgtggagaagatcctgcagaacgacaag
cgctacctggtgctggagtgcgtccccgaggagcgccgcaagctcataatgttctacatc
gaggacctggaccgccgcggcccgcccccgccccccaccgcctccgagcccacgcgccgc
tccaccaagtga
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