Syngnathoides biaculeatus (alligator pipefish): 133499910
Help
Entry
133499910 CDS
T09681
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03022
Basal transcription factors
sbia03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133499910 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
133499910 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133499910 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133499910 (gtf2h2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
133499910 (gtf2h2)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
133499910 (gtf2h2)
BRITE hierarchy
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
DZR
IBR
Motif
Other DBs
NCBI-GeneID:
133499910
NCBI-ProteinID:
XP_061674313
LinkDB
All DBs
Position
4:complement(13653967..13738146)
Genome browser
AA seq
392 aa
AA seq
DB search
MDDEPERTKRWEGGYERTWEILKEDESGSLKATVEEILFQSKRGRILKNSGQIRLGMMRH
LFVVIDCSKSMEDQDLKPNRLTATLKLMEGFIEEYFDQNPISQVGIIVTKNKRAEKLTDL
SGNPKKHIEILKKAVESTVCLGEPSLYNSLNLALQTLKHMPGHTSREIVIILSSLTTCDP
ANIYEMIQTMKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLVTLHVKP
PPASSSSECSLIRMGFPQHTFSSLTDQNAKPSFSMALLDGSHDADLSLGGYLCPQCHSKY
MELPVECKVCGLTLVSAPHLARSFHHLFPLHVFIETPIGNPPQKRFCESCQGELKDQRMF
TCPFCQSIFCVECDHFIHDSLHCCPGCVHTTL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaaccagagagaactaaacgctgggaaggtggctatgagaggacatgggaa
attttgaaggaggatgaatctggatcactcaaagccacagttgaggagatcctattccag
tccaaaaggggaagaatattaaagaactctggccaaataaggcttggaatgatgcggcat
ctctttgtggtaattgactgttctaaaagtatggaggatcaagacctaaaaccaaaccgc
ctcactgcaacgctaaagctgatggaaggttttattgaagaatattttgaccagaatccc
atcagccaggtgggaattatcgttacaaagaataaaagggctgagaagcttacagacttg
tcagggaacccaaagaaacacattgaaattctgaagaaagcagtggaaagcactgtttgt
ctaggggaaccatctctgtacaattccctgaacttggccttacagaccctgaaacacatg
cctgggcacacaagccgggagattgtgatcatcctcagcagcctcaccacatgtgaccca
gccaacatctatgagatgatccagaccatgaagtcattgaaggtgcgggtctctgtaatt
ggtctgtcagcggaggttcgggtgtgtaccgtgttgacgagggagactggaggatcgtac
catgtcatcttggatgagagccatttcaaagagctgttggtgacactgcatgtgaaacct
ccccctgccagctcctcatctgaatgctctttaatacgtatggggtttccccagcatacc
tttagctcactgactgaccagaacgctaaaccctctttcagcatggctctattagatggc
agccacgatgcagatctctctctgggaggatacttatgtccacagtgtcattctaagtac
atggagcttccagtggaatgtaaagtctgtggtttgactctggtgtctgcaccacaccta
gctagatcctttcaccacctttttcccctacatgtcttcatcgaaacaccgattggaaac
cccccccaaaaaaggttctgtgaatcttgtcaaggagaattaaaagatcaaaggatgttc
acctgcccattctgtcagagtattttttgtgtggagtgtgatcacttcattcatgactca
ctacactgctgccctggttgtgttcacaccaccctttaa
DBGET
integrated database retrieval system
