Syngnathoides biaculeatus (alligator pipefish): 133506077
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Entry
133506077 CDS
T09681
Name
(RefSeq) RNA binding protein fox-1 homolog 2-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133506077
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133506077
BRITE hierarchy
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_8
Motif
Other DBs
NCBI-GeneID:
133506077
NCBI-ProteinID:
XP_061685804
LinkDB
All DBs
Position
9:19649632..19689045
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AA seq
454 aa
AA seq
DB search
MLMSTDVASIMLPVSRGLMERDRELDALAGVHPNAGGAPAAVRGMKRGDPEPDGHTAASL
LDSTGAECKRPRMDGSGEAGQNNDPLTLGYHGYPSHSQGSQDSTSGQEGLVPPAFAAFPP
PPPPPPQNGLALDYGGSLYAAGGVQGPVEAGGAVNNVVNVVNSLGGQSDVSSQIDGQSGS
GGGGGGGGGGGGGSIDDSDAKGTPKRLHVSNIPFRFRDPDLRQMFGQYGKILDVEIIFNE
RGSKGFGFVTFETSADAERAREKLHGTLVEGRKIEVNNATARVMTNKKMVTPYSNGEGLA
ALPYAGWKLSPVMGAMYSPELYTVPGFPYPAAAAAAASTAAATFRGAHLRGRARPVYSAV
RAAVPQAAIPAYPGVMAYQDGFYGAADLYGGYAAYRYAQPTAVATPAAAAAAYSDSYGRV
YTADPYHAALAPAAYGVGAMATLYRGGYSRFTPY
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgttaatgtcgaccgacgttgcatctatcatgctgcccgtgtcccgcggcctgatggag
cgggatcgagaactcgacgccctggccggggtgcatcccaacgccggcggcgccccggct
gctgtccggggaatgaagcgaggagacccggagcccgatggacacacggcggcctcgctg
ctcgactcgaccggggctgagtgcaagcggcctcgaatggacggctccggcgaggctgga
cagaataatgacccgctgacccttggttaccatggatacccatctcacagtcagggttcc
caggatagtacttccggtcaggagggactcgtaccgccggcgttcgcggccttccctcct
cctcctccgccgcccccccagaacggccttgccctggattacggcggcagcctgtacgcg
gcgggcggggtgcagggccccgtggaagccggcggagccgtcaacaatgtcgtcaacgtt
gtcaacagcctcggtggccaatcggacgtctcctctcagattgacggccagtcaggctca
ggaggaggaggcggcggcggcggcggcggcggtggggggagcatcgatgattcagacgcc
aaagggacgcccaaacgcctccacgtgtccaacattcccttccgcttccgagatcctgac
ctgcggcagatgtttgggcaatatggcaaaatcctcgacgtggagatcattttcaacgag
cgaggatccaagggcttcggtttcgtcacattcgagacgagcgcagatgccgagcgagcc
cgagagaagcttcacggcaccctggtggaaggacgtaaaattgaggtcaacaacgccacc
gccagggtgatgaccaacaagaagatggtgaccccgtactccaatggagagggtcttgcg
gctctaccatacgctggctggaagttaagtcccgtgatgggagccatgtacagccccgag
ctctacacggtgccagggttcccgtacccggccgcggcggccgccgccgcctccacggcc
gcggcgaccttccgcggcgctcacctgcggggtcgcgcgcggcccgtctacagcgcggtc
agggcggccgtgccgcaggccgccatccccgcctaccctggcgtgatggcctatcaggat
gggttttacggtgcggccgatctttatggaggctacgccgcgtaccgttacgcccagccg
accgccgtagcgacacccgccgccgccgcagcggcgtacagcgacagctacggccgcgtt
tacacagccgacccgtaccacgctgcactcgccccggccgcctacggtgttggagccatg
gccacgctgtacagggggggctacagtagattcaccccttattaa
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