Syngnathoides biaculeatus (alligator pipefish): 133508277
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Entry
133508277 CDS
T09681
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
sbia04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133508277 (syvn1)
04120 Ubiquitin mediated proteolysis
133508277 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133508277 (syvn1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133508277 (syvn1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133508277 (syvn1)
BRITE hierarchy
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
LHC
zf-Nse
FANCL_C
Motif
Other DBs
NCBI-GeneID:
133508277
NCBI-ProteinID:
XP_061690035
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All DBs
Position
11:complement(3616888..3639434)
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AA seq
641 aa
AA seq
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MERIVFLVKFKAAIQSNMVRATLVTITSLALTAAVVVHAYLLKHQFYPTVVYLTKSSPSM
AVLYIQAFVLVFLLGKFMRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRF
VALFTLLVFLKCFHWLAEDRVDFMERSPNISCLFHFRVLSLMGLLGVLDFLFVYHACQSI
INRGASVQLVFGFEYAILLTMVLTVFIKYVLHTVDLQSDNPWDNKAVYMLYTELFTGFIK
VLLYIAFMTIMMKVHTFPLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPED
LQASDNVCIICREEMVTGAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASHNNQTP
TPAQAPPPAPVAPANAPAVQPANVAPGMLPGFPPGLFPFWGPFPAMPPPAAAAPGAANAP
QGSTEVAQADGTSQSTSSGADPTTAATPGSAMPGFPFSFPPSPFPTAPWFSMPPPPPPFM
SSMPPPPPSLSQLSEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATL
TPPRSDCGSAGEASGTSNLASLATTGASTNEPSREKNSCPSLSSAPVQTDDSTPTSTTWD
SERRDKTYEGSEDESGEPNAAELRRRRLRKLETAPLTPADD
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaattgttttcttggtcaaattcaaagctgcaattcagtccaacatggtacga
gcaaccttggtgaccatcaccagtctggcattgactgctgctgtggtggtgcacgcttac
ctcctgaaacaccagttttacccaactgtagtctacctcaccaagagcagccccagcatg
gcggtcttgtacattcaggcctttgtattggtgtttcttctgggaaaattcatgcggaaa
gtgttttttggacagctaagggctgcagaaatggagcatctcattgaacgttcgtggtac
gcagtgaccgagacgtgcctggccttcactgtattcagggatgacttctccccacggttt
gttgccctcttcacacttctggtcttccttaagtgcttccactggctggctgaggaccga
gtggactttatggagcgaagtccaaacatatcttgtctttttcactttagagtgttatca
ttgatgggcctattgggagtgttggactttctgtttgtttaccatgcctgtcaaagtatt
atcaaccgaggggcctctgtccaacttgtttttggctttgagtatgccatcctgttgacc
atggtgttgacagtgttcatcaagtatgtcctgcacactgttgatttgcaaagtgacaat
ccttgggacaacaaggctgtctatatgctctatactgagctcttcactggtttcatcaaa
gttctcttatacattgcctttatgactattatgatgaaggttcacactttccccttgttt
gccattcggcccatgtatctggctatgagacaatttaagaaagctgtaactgatgctata
atgtctcggcgagccatccgcaacatgaatacactctaccctgacgccactcctgaagat
ctgcaggcctctgacaacgtttgtatcatctgtcgggaggaaatggtgactggagcaaag
aaactaccttgtaatcacattttccactccagttgcttgcgttcctggttccagagacag
cagacctgccccacctgtcgcatggatgtccttcgggcatctcataacaatcagactcct
acccctgcccaggctccaccccctgctccggtcgcccctgccaatgctcctgctgtccag
ccagctaatgtggcacccggcatgttgcctggcttcccaccgggtctctttcccttctgg
ggtccctttcctgccatgcctcctccagctgctgcagctccaggtgctgccaatgcacca
cagggcagcacagaagtagcacaggcagatggtaccagccagtcaacttcatctggtgcg
gatccgaccacagctgccactccggggtcagcgatgccaggatttcccttctcttttccc
ccatctcccttcccaactgcaccgtggttctccatgccaccacctcctcctcctttcatg
tcatcgatgcctcctcctcctccgtccctgtcccagctgtcagaggaggagctcagggag
ctagaggccgagggccgacggggcctggaggccaggctgcagtgtcttcaaaacattcac
accctgctggatgccgccatgcttaacatccaccattacctcagcacagtcgccacactt
actcctccaaggtctgactgtggcagcgcaggagaagccagcgggacaagcaatttggct
tcattagccactactggtgcaagcacaaacgagccgagtcgagagaagaattcctgcccc
agcttgagcagtgctccagtccaaacggatgactcaactcccacatctaccacttgggat
agtgagaggagagacaagacatatgaaggatcggaggatgagtccggcgaacccaatgct
gccgagttgaggcgcaggcggcttcggaagctcgaaacagcacctctaacacctgcagac
gattga
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