Syngnathoides biaculeatus (alligator pipefish): 133510220
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Entry
133510220 CDS
T09681
Symbol
pcgf5b
Name
(RefSeq) polycomb group RING finger protein 5-B
KO
K11489
polycomb group RING finger protein 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
133510220 (pcgf5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133510220 (pcgf5b)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
133510220 (pcgf5b)
BRITE hierarchy
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-RING_10
zf-RING_5
zf-C3HC4_4
zf-Nse
zf-rbx1
zf-C3HC4_5
zf-RING_6
TRAF3_RING
zf-C3HC4_3
Prok-RING_4
DZR
Motif
Other DBs
NCBI-GeneID:
133510220
NCBI-ProteinID:
XP_061693995
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All DBs
Position
12:361111..365238
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AA seq
236 aa
AA seq
DB search
MAAAARTHRVRDFNHFITCYLCGGYLIKPATVTECLHTFCKSCIVQHFEESNDCPKCGIQ
VHETNPLEMLRLDNTLEEIIFKLVPGLREHEEERELEFWRKNRRGDNLPADVTAGAGLPH
DSGGAAAADDDYHRSDPQIAICLDCLRNTGRVGDASVTDLMKKFIRCSSRVTVGTIKKFL
SLKLKLPSSYELDVLCNGEIMGRDHTMEFIYMTRWRLHADNTYPMVLEYRPRVDFG
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgcgaggacgcaccgagtgagagactttaaccatttcattacctgctac
ctttgcggcggttacctcatcaagccagccaccgtcaccgagtgcctgcacaccttctgt
aagagttgcatcgtgcagcactttgaagagagcaacgactgtcccaaatgtggcatccaa
gtccacgagacgaaccccctggagatgctcaggttggacaacaccctggaggagatcatc
ttcaagctggttccgggcctgcgagagcacgaggaggagcgagagctggagttctggagg
aaaaaccggcgtggcgacaacctcccagctgacgtcacggcgggggcggggcttccccac
gacagcggcggcgccgccgccgccgacgacgactaccacaggagcgacccccagatcgcc
atctgcctggactgtctgcgcaacacgggccgcgtcggcgacgccagcgtcacggatctg
atgaagaagttcattcgctgttccagtcgcgtgacggtcggaaccatcaagaagtttctc
agcctcaaactcaagctgcccagctcctacgagctggacgtgttgtgtaacggcgagatt
atgggccgagaccacaccatggagttcatctacatgaccagatggaggctgcacgccgac
aacacgtacccgatggtcctggagtaccgaccgcgcgtcgactttggatga
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